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WormBase Tree Display for Gene: WBGene00255870

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Name Class

WBGene00255870SMapS_parentSequenceSRAE_scaffold1
IdentityVersion1
NameSequence_nameSRAE_0000013300
Molecular_nameSRAE_0000013300
SRAE_0000013300.1
SRP11481
Public_nameSRAE_0000013300
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:52WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00006774.04972From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
5.95732From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
6.05763From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
6.89782From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
6.94754From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
7.11129From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
WBls:000067815.7702From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
15.7823From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
15.9017From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
17.0714From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
18.1752From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
19.0891From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
21.8648From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
28.1218From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
WBls:000068020.397From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006825.72431From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
GO_annotation00263647
Ortholog (29)
ParalogWBGene00255929Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00256156Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00257433Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00259779Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00259856Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261749Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264198Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00266450Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267447Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Is an ortholog of C. elegans ttx-3. In C. elegans, ttx-3 is involved in several processes, including olfactory learning; regulation of developmental process; and response to temperature stimulus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSSRAE_0000013300
Corresponding_transcriptSRAE_0000013300.1
Other_sequenceJI479595.1
Acan_isotig13660
JI171393.1
Dviv_isotig25707
TS04101
Experimental_infoExpression_clusterWBPaper00050919:up_infective-L3_vs_free-living_mRNA
WBPaper00050919:up_parasitic_vs_free-living_mRNA
MethodGene