WormBase Tree Display for Gene: WBGene00271796
expand all nodes | collapse all nodes | view schema
| WBGene00271796 | SMap | S_parent | Sequence | C54F6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C54F6.20 | |||||||
| Molecular_name | C54F6.20 | ||||||||
| C54F6.20.1 | |||||||||
| CE39708 | |||||||||
| Other_name | CELE_C54F6.20 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C54F6.20 | ||||||||
| DB_info | Database | NDB | locus_tag | CELE_C54F6.20 | |||||
| NCBI | gene | 183805 | |||||||
| RefSeq | protein | NM_072536.8 | |||||||
| TrEMBL | UniProtAcc | A0A2C9C3H6 | |||||||
| UniProt_GCRP | UniProtAcc | A0A2C9C3H6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 21 Sep 2017 14:34:34 | WBPerson4025 | Event | Split_from | WBGene00016924 | ||
| Split_from | WBGene00016924 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (17) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00271219 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | |||||
| CSP39.g6993 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| FL83_08316 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| WBGene00053162 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| WBGene00107817 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00013081 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00016923 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in rect_D; rect_VL; and rect_VR based on single-cell RNA-seq studies. Is affected by several genes including dcr-1; isp-1; and unc-30 based on RNA-seq and microarray studies. Is affected by four chemicals including Diazinon; Quercetin; and Humic Substances based on microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C54F6.20 | |||||||
| Corresponding_transcript | C54F6.20.1 | ||||||||
| Other_sequence | CB043125.1 | ||||||||
| HC04729 | |||||||||
| HC04800 | |||||||||
| HC02933 | |||||||||
| HC02921 | |||||||||
| HC02630 | |||||||||
| Dviv_isotig17991 | |||||||||
| AW735289.1 | |||||||||
| HC04750 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043168 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012405 | Inferred_automatically | RNAi_primary | |||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (33) | |||||||||
| Map_info | Positive | Positive_clone | C54F6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.7694 | |||||||
| Method | Gene |
