WormBase Tree Display for Gene: WBGene00274758
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WBGene00274758 | SMap | S_parent | Sequence | PPA_ChrII | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 7 | |||||||
Name | CGC_name | Ppa-ire-1.4 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA36389 | ||||||||
Molecular_name | PPA36389 | ||||||||
PPA36389.1 | |||||||||
PP59495 | |||||||||
Other_name | Ppa-ire-1 | From_analysis | Inferred_from_orthology | ||||||
Public_name | Ppa-ire-1.4 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 24 Nov 2017 16:14:21 | WBPerson4055 | Event | Created | |||
2 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Ppa-ire-1.4 | ||||
3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
4 | 01 Oct 2019 10:47:49 | WBPerson1983 | Name_change | CGC_name | Ppa-ire-1 | ||||
5 | 27 Nov 2019 12:48:14 | WBPerson1983 | Name_change | CGC_name | Ppa-ire-1.2 | ||||
Other_name | Ppa-ire-1 | ||||||||
6 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
7 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-ire-1.4 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ire | ||||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
GO_annotation | 00281960 | ||||||||
00281961 | |||||||||
00281962 | |||||||||
00281963 | |||||||||
00281964 | |||||||||
Ortholog (51) | |||||||||
Paralog | WBGene00091492 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
WBGene00117190 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00273905 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00274756 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable ATP binding activity; RNA nuclease activity; and protein kinase activity. Predicted to be involved in mRNA processing. Is an ortholog of C. elegans ire-1. In C. elegans, ire-1 is involved in nematode larval development; response to endoplasmic reticulum stress; and response to hypoxia. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA36389 | |||||||
Corresponding_transcript | PPA36389.1 | ||||||||
Remark | [190208 pad] The CGC name Ppa-ire-1.4 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[210528 pad] The CGC name Ppa-ire-1.2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |