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WormBase Tree Display for Gene: WBGene00274922

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Name Class

WBGene00274922SMapS_parentSequencePPA_ChrII
IdentityVersion6
NameCGC_namePpa-clh-5From_analysisInferred_from_orthology
Sequence_namePPA36553
Molecular_namePPA36553
PPA36553.1
PP65122
Public_namePpa-clh-5
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:21WBPerson4055EventCreated
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_namePpa-clh-5
308 Feb 2019 15:42:27WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:26WBPerson1983Name_changeCGC_namePpa-clh-5
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_namePpa-clh-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclh
RNASeq_FPKMWBls:00000322.53416From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.17479From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
2.53416From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
3.99021From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00282084
00282085
00282086
00282087
Ortholog (30)
ParalogWBGene00094298Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095736Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096537Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111916Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00112977Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113764Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00115912Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00117576Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277464Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277665Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable voltage-gated chloride channel activity. Predicted to be involved in chloride transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans clh-5.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA36553
Corresponding_transcriptPPA36553.1
Other_sequence (45)
Experimental_infoMicroarray_resultsGPL14372_Probes_46435
GPL14372_Probes_79076
GPL14372_Probes_79077
GPL14372_Probes_79078
Remark[190208 pad] The CGC name Ppa-clh-5 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-clh-5 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene