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WormBase Tree Display for Gene: WBGene00275446

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Name Class

WBGene00275446SMapS_parentSequencePPA_ChrI
IdentityVersion2
NameCGC_namePpa-acox-1.5From_analysisInferred_from_orthology
Sequence_namePPA37077
Molecular_namePPA37077
PPA37077.1
PP54952
Public_namePpa-acox-1.5
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:21WBPerson4055EventCreated
228 Jul 2021 11:12:29WBPerson1983Name_changeCGC_namePpa-acox-1.5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classacox
RNASeq_FPKMWBls:00000324.93286From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.61518From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
2.91267From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00282365
00282366
00282367
00282368
00282369
Ortholog (25)
Paralog (18)
Structured_descriptionAutomated_descriptionPredicted to enable acyl-CoA oxidase activity and flavin adenine dinucleotide binding activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to be located in peroxisome. Is an ortholog of C. elegans acox-1.5. In C. elegans, acox-1.5 is involved in pheromone biosynthetic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA37077
Corresponding_transcriptPPA37077.1
Other_sequence (42)
Experimental_infoMicroarray_resultsGPL14372_Probes_55580
GPL14372_Probes_55581
GPL14372_Probes_55582
GPL14372_Probes_55585
GPL14372_Probes_55586
GPL14372_Probes_55587
GPL14372_Probes_55588
GPL14372_Probes_55589
Expression_clusterWBPaper00041207:PP_dauer_down
WBPaper00041606:PP_X.nematophila_regulated
MethodGene