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WormBase Tree Display for Gene: WBGene00275706

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Name Class

WBGene00275706SMapS_parentSequencePPA_ChrV
IdentityVersion5
NameSequence_namePPA37337
Molecular_namePPA37337
PPA37337.1
PP69992
Public_namePPA37337
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:21WBPerson4055EventCreated
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_namePpa-aptf-2.4
308 Feb 2019 15:42:27WBPerson1983Name_changeCGC_nameRemoved
404 Feb 2020 15:43:57WBPerson1983Name_changeCGC_namePpa-aptf-2.4
504 Jun 2020 14:38:22WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00282466
00282467
00282468
Ortholog (54)
ParalogWBGene00090721Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00090793Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106738Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00108589Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109132Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00112539Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116196Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00118703Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274029Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281816Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is an ortholog of C. elegans aptf-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA37337
Corresponding_transcriptPPA37337.1
Experimental_infoMicroarray_resultsGPL14372_Probes_26580
GPL14372_Probes_26581
GPL14372_Probes_26582
GPL14372_Probes_26583
GPL14372_Probes_26584
Remark[190208 pad] The CGC name Ppa-aptf-2.4 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[200603 pad] The CGC name Ppa-aptf-2.4 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene