WormBase Tree Display for Gene: WBGene00276243
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| WBGene00276243 | SMap | S_parent | Sequence | PPA_ChrI | ||||
|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | ||||||
| Name | Sequence_name | PPA37874 | ||||||
| Molecular_name | PPA37874 | |||||||
| PPA37874.1 | ||||||||
| PP54266 | ||||||||
| Public_name | PPA37874 | |||||||
| Species | Pristionchus pacificus | |||||||
| History | Version_change | 1 | 24 Nov 2017 16:14:21 | WBPerson4055 | Event | Created | ||
| Status | Live | |||||||
| Gene_info | Biotype | SO:0001217 | ||||||
| RNASeq_FPKM | WBls:0000032 | 10.0774 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||||
| RNASeq.pristionchus.WBls:0000032.control_median | ||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||||
| WBls:0000101 | 10.0774 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||
| 11.9009 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
| RNASeq.pristionchus.WBls:0000101.control_median | ||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||||
| 7.3261 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| Ortholog (33) | ||||||||
| Paralog (16) | ||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Winged helix DNA-binding domain superfamily; C-type lectin fold; Winged helix-like DNA-binding domain superfamily; C-type lectin-like/link domain superfamily; Methyltransferase domain; and S-adenosyl-L-methionine-dependent methyltransferase. Is an ortholog of C. elegans rpl-12. In C. elegans, rpl-12 is involved in regulation of alternative mRNA splicing, via spliceosome. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | |||||||
| WBPerson37462 | ||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
| Molecular_info | Corresponding_CDS | PPA37874 | ||||||
| Corresponding_transcript | PPA37874.1 | |||||||
| Other_sequence (22) | ||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_10926 | ||||||
| GPL14372_Probes_10927 | ||||||||
| GPL14372_Probes_10928 | ||||||||
| GPL14372_Probes_10929 | ||||||||
| Method | Gene |
