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WormBase Tree Display for Gene: WBGene00277215

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Name Class

WBGene00277215SMapS_parentSequencePPA_ChrII
IdentityVersion1
NameSequence_namePPA38846
Molecular_namePPA38846
PPA38846.1
PP17359
Public_namePPA38846
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:21WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000032149.594From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010113.9496From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
54.5145From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00283593
Ortholog (44)
Paralog (148)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-107; col-65; and col-54. In C. elegans, col-54 is involved in defense response to Gram-negative bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA38846
Corresponding_transcriptPPA38846.1
Other_sequenceBG468042.1
PP01095
Tcir_isotig26948
Tcir_isotig23521
PPC01053_1
Experimental_infoMicroarray_resultsGPL14372_Probes_67753
Expression_clusterWBPaper00041606:PP_X.nematophila_regulated
MethodGene