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WormBase Tree Display for Gene: WBGene00278143

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Name Class

WBGene00278143SMapS_parentSequencePPA_ChrIV
IdentityVersion2
NameCGC_namePpa-snrp-3.2From_analysisInferred_from_orthology
Sequence_namePPA39774
Molecular_namePPA39774
PPA39774.1
PP26258
Public_namePpa-snrp-3.2
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:22WBPerson4055EventCreated
228 Jul 2021 11:12:29WBPerson1983Name_changeCGC_namePpa-snrp-3.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsnrp
RNASeq_FPKMWBls:000003214.6666From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010113.5526From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
14.6666From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
25.9913From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00284157
00284158
00284159
00284160
00284161
Ortholog (42)
ParalogWBGene00304414Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable nucleic acid binding activity and zinc ion binding activity. Predicted to be involved in spliceosomal snRNP assembly. Predicted to be part of U1 snRNP. Is an ortholog of C. elegans snrp-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA39774
Corresponding_transcriptPPA39774.1
Other_sequencePPC21810_1
Acan_isotig14558
Experimental_infoMicroarray_resultsGPL14372_Probes_74201
GPL14372_Probes_74202
Expression_clusterWBPaper00041207:PP_dauer_up
MethodGene