WormBase Tree Display for Gene: WBGene00280518
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| WBGene00280518 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | Ppa-tir-1.3 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA42149 | ||||||||
| Molecular_name | PPA42149 | ||||||||
| PPA42149.1 | |||||||||
| PP56450 | |||||||||
| Public_name | Ppa-tir-1.3 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 24 Nov 2017 16:14:22 | WBPerson4055 | Event | Created | |||
| 2 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-tir-1.3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tir | ||||||||
| RNASeq_FPKM | WBls:0000032 | 2.2947 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 11.7427 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 2.2947 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 4.67913 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| GO_annotation | 00285767 | ||||||||
| 00285768 | |||||||||
| 00285769 | |||||||||
| 00285770 | |||||||||
| 00285771 | |||||||||
| 00285772 | |||||||||
| 00285773 | |||||||||
| 00285774 | |||||||||
| 00285775 | |||||||||
| 00285776 | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00099021 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00090511 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00109079 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00275661 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable several functions, including DNA-binding transcription factor activity; NAD+ nucleosidase activity; and signaling adaptor activity. Predicted to be involved in several processes, including ATP metabolic process; negative regulation of MyD88-independent toll-like receptor signaling pathway; and response to axon injury. Is an ortholog of C. elegans tir-1. In C. elegans, tir-1 is involved in several processes, including NAD catabolic process; defense response to other organism; and regulation of gene expression. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA42149 | |||||||
| Corresponding_transcript | PPA42149.1 | ||||||||
| Other_sequence | PPC17001_1 | ||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_91047 | |||||||
| Method | Gene |
