Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00303180

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00303180SMapS_parentSequencecb25.fpc4260b
IdentityVersion1
NameSequence_nameCBG31245
Molecular_nameCBG31245
CBG31245.1
CBP48894
Public_nameCBG31245
SpeciesCaenorhabditis briggsae
HistoryVersion_change123 Apr 2018 14:52:29WBPerson4025EventSplit_fromWBGene00040478
Split_fromWBGene00040478
StatusLive
Gene_infoBiotypeSO:0001217
Allele (18)
RNASeq_FPKMWBls:00000020.04935From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.214455From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.23599From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.358026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.297008From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.361853From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.804045From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.216912From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.222146From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.227381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.148098From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:00000240From_analysis (12)
WBls:00000270From_analysisRNASeq.briggsae.WBls:0000027.control_mean
RNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.032929From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.018137From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0.072549From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0From_analysisRNASeq.briggsae.WBls:0000038.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000410.189865From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.601515From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.607022From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.626521From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.64602From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.963155From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.38182From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.385718From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.49637From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.528933From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000630.115704From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.424855From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.485779From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.745748From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.14259From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.462129From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.48805From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.499403From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.032929From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.207865From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.016465From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.213134From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00302417
00302418
00302419
00302420
OrthologCSP40.g12727Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g12742Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g23069Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g23070Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g23071Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_IV.g13011Caenorhabditis nigoniFrom_analysisWormBase-Compara
ParalogWBGene00040479Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040480Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG31245
Corresponding_transcriptCBG31245.1
Experimental_infoExpr_patternExpr1062910
Microarray_resultsGPL8303_CB6_WBGene00040478_A
GPL8303_CB6_WBGene00040478_B
GPL14143_CBG21788_2198-2257_0.885_40_B
GPL14143_CBG21788_2559-2618_0.940_3_C
MethodGene