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WormBase Tree Display for Gene: WBGene00304477

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Name Class

WBGene00304477SMapS_parentSequencePPA_ChrIII
IdentityVersion4
NameCGC_namePpa-rev-1From_analysisInferred_from_orthology
Sequence_namePPA46698
Molecular_namePPA46698
PPA46698.1
PP74548
Public_namePpa-rev-1
SpeciesPristionchus pacificus
HistoryVersion_change121 Feb 2019 14:49:04WBPerson4055EventCreated
208 May 2019 10:09:23WBPerson1983Name_changeCGC_namePpa-rev-1
328 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
428 Jul 2021 11:12:28WBPerson1983Name_changeCGC_namePpa-rev-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrev
RNASeq_FPKMWBls:000003214.4754From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010111.948From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
14.4754From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
21.3685From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00302802
00302803
Ortholog (27)
ParalogWBGene00304440Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304482Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304702Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable damaged DNA binding activity. Predicted to be involved in DNA repair. Is an ortholog of C. elegans rev-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA46698
Corresponding_transcriptPPA46698.1
Other_sequenceACC14980_1
FC542749.1
Dviv_isotig32865
FC546309.1
PPC21400_1
JI171199.1
Experimental_infoMicroarray_resultsGPL14372_Probes_83159
GPL14372_Probes_83160
Remark[210528 pad] The CGC name Ppa-rev-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene