WormBase Tree Display for Gene: WBGene00304530
expand all nodes | collapse all nodes | view schema
| WBGene00304530 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | Ppa-eif-2Bepsilon | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA46751 | ||||||||
| Molecular_name | PPA46751 | ||||||||
| PPA46751.1 | |||||||||
| PP74749 | |||||||||
| Public_name | Ppa-eif-2Bepsilon | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 21 Feb 2019 14:49:04 | WBPerson4055 | Event | Created | |||
| 2 | 08 May 2019 10:09:26 | WBPerson1983 | Name_change | CGC_name | Ppa-eif-2Bepsilon | ||||
| 3 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-eif-2Bepsilon | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | eif | ||||||||
| RNASeq_FPKM | WBls:0000032 | 22.6857 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 20.9579 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 22.6857 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 40.188 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00099278 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00103230 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: W2 domain; eIF4-gamma/eIF5/eIF2-epsilon; Armadillo-type fold; and Nucleotide-diphospho-sugar transferases. Is an ortholog of C. elegans eif-2Bepsilon. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA46751 | |||||||
| Corresponding_transcript | PPA46751.1 | ||||||||
| Other_sequence | Oden_isotig11958 | ||||||||
| Acan_isotig08192 | |||||||||
| JI169001.1 | |||||||||
| ACC30565_1 | |||||||||
| TSC12916_1 | |||||||||
| EW742236.1 | |||||||||
| ES564692.1 | |||||||||
| Oden_isotig11957 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_64192 | |||||||
| Remark | [210528 pad] The CGC name Ppa-eif-2Bepsilon was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
