WormBase Tree Display for Gene: WBGene00304603
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| WBGene00304603 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | Ppa-sec-16A.1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA46824 | ||||||||
| Molecular_name | PPA46824 | ||||||||
| PPA46824.1 | |||||||||
| PP74576 | |||||||||
| Public_name | Ppa-sec-16A.1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 21 Feb 2019 14:49:04 | WBPerson4055 | Event | Created | |||
| 2 | 28 Jul 2021 11:12:27 | WBPerson1983 | Name_change | CGC_name | Ppa-sec-16A.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sec | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0.621768 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0.207256 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| Ortholog (50) | |||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Ancestral coatomer element 1, Sec16/Sec31; Vesicle coat trafficking protein Sec16 mid-region; Sec23-binding domain of Sec16; and Sec16, central conserved domain. Is an ortholog of C. elegans sec-16A.1. In C. elegans, sec-16A.1 is involved in endoplasmic reticulum to Golgi vesicle-mediated transport and protein localization to endoplasmic reticulum exit site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA46824 | |||||||
| Corresponding_transcript | PPA46824.1 | ||||||||
| Other_sequence (11) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_24937 | |||||||
| GPL14372_Probes_24940 | |||||||||
| GPL14372_Probes_78595 | |||||||||
| Method | Gene |
