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WormBase Tree Display for Gene: WBGene00304671

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Name Class

WBGene00304671SMapS_parentSequencePPA_ChrV
IdentityVersion1
NameSequence_namePPA46892
Molecular_namePPA46892
PPA46892.1
PP74364
Public_namePPA46892
SpeciesPristionchus pacificus
HistoryVersion_change121 Feb 2019 14:49:04WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000325.03486From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010119.8204From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
5.03486From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
8.28509From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00302988
00302989
00302990
Ortholog (33)
ParalogWBGene00091716Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00093680Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099275Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00112263Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116898Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00204228Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277970Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279783Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00306023Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ubiquitin protein ligase activity. Predicted to be involved in ubiquitin-dependent protein catabolic process. Is an ortholog of C. elegans Y92H12A.2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA46892
Corresponding_transcriptPPA46892.1
Other_sequence (38)
Experimental_infoMicroarray_resultsGPL14372_Probes_53924
GPL14372_Probes_53925
GPL14372_Probes_53926
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041606:PP_X.nematophila_regulated
MethodGene