WormBase Tree Display for Gene: WBGene00304843
expand all nodes | collapse all nodes | view schema
| WBGene00304843 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | Ppa-swip-10 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA46989 | ||||||||
| Molecular_name | PPA46989 | ||||||||
| PPA46989.1 | |||||||||
| PP75031 | |||||||||
| Public_name | Ppa-swip-10 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 25 Jul 2019 15:17:51 | WBPerson4055 | Event | Split_from | WBGene00103176 | ||
| 2 | 01 Oct 2019 10:47:49 | WBPerson1983 | Name_change | CGC_name | Ppa-swip-10 | ||||
| 3 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-swip-10 | ||||
| Split_from | WBGene00103176 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | swip | ||||||||
| RNASeq_FPKM | WBls:0000032 | 9.65585 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 3.21862 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| Ortholog (19) | |||||||||
| Paralog | WBGene00108851 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00304928 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Metallo-beta-lactamase superfamily; Metallo-beta-lactamase; Ribonuclease Z/Hydroxyacylglutathione hydrolase-like; and Metallo-beta-lactamase domain-containing protein 1. Is an ortholog of C. elegans swip-10. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA46989 | |||||||
| Corresponding_transcript | PPA46989.1 | ||||||||
| Other_sequence (61) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_55544 | |||||||
| GPL14372_Probes_55545 | |||||||||
| GPL14372_Probes_55546 | |||||||||
| Remark | [210528 pad] The CGC name Ppa-swip-10 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
