WormBase Tree Display for Gene: WBGene00304964
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| WBGene00304964 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | Ppa-gtf-2F2 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA47106 | ||||||||
| Molecular_name | PPA47106 | ||||||||
| PPA47106.1 | |||||||||
| PP75344 | |||||||||
| Public_name | Ppa-gtf-2F2 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 26 Sep 2019 11:40:42 | WBPerson4055 | Event | Split_from | WBGene00105311 | ||
| 2 | 27 Nov 2019 12:48:14 | WBPerson1983 | Name_change | CGC_name | Ppa-gtf-2F2 | ||||
| 3 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-gtf-2F2 | ||||
| Split_from | WBGene00105311 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gtf | ||||||||
| RNASeq_FPKM | WBls:0000032 | 28.5605 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 121.459 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 28.5605 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 50.0065 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| GO_annotation | 00303324 | ||||||||
| 00303325 | |||||||||
| 00303326 | |||||||||
| Ortholog (27) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in transcription initiation at RNA polymerase II promoter. Predicted to be part of transcription factor TFIIF complex. Is an ortholog of C. elegans gtf-2F2. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA47106 | |||||||
| Corresponding_transcript | PPA47106.1 | ||||||||
| Other_sequence (25) | |||||||||
| Remark | [210528 pad] The CGC name Ppa-gtf-2F2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
