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WormBase Tree Display for Gene: WBGene00305119

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Name Class

WBGene00305119SMapS_parentSequencePPA_ChrV
IdentityVersion3
NameSequence_namePPA47231
Molecular_namePPA47231
PPA47231.1
PP75530
Public_namePPA47231
SpeciesPristionchus pacificus
HistoryVersion_change123 Oct 2019 16:56:39WBPerson4055EventSplit_fromWBGene00101515
204 Feb 2020 15:43:56WBPerson1983Name_changeCGC_namePpa-itx-1
328 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
Split_fromWBGene00101515
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
2.849From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
8.54701From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
OrthologWBGene00232623Brugia malayiFrom_analysisWormBase-Compara
WBGene00238476Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g9763Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP31.g1894Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g11923Caenorhabditis quiockensisFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05597Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g9873Panagrellus redivivusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: EGF-like domain; Laminin G domain; and Concanavalin A-like lectin/glucanase domain superfamily.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA47231
Corresponding_transcriptPPA47231.1
Other_sequencePPC13070_1
Experimental_infoMicroarray_resultsGPL14372_Probes_48304
GPL14372_Probes_48305
GPL14372_Probes_48306
GPL14372_Probes_48308
Expression_clusterWBPaper00041207:PP_dauer_down
Remark[210528 pad] The CGC name Ppa-itx-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene