WormBase Tree Display for Gene: WBGene00305164
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| WBGene00305164 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | Ppa-spe-48 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA47270 | ||||||||
| Molecular_name | PPA47270 | ||||||||
| PPA47270.1 | |||||||||
| PP06235 | |||||||||
| Public_name | Ppa-spe-48 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 21 Nov 2019 15:29:54 | WBPerson4055 | Event | Split_from | WBGene00117807 | ||
| 2 | 04 Feb 2020 15:43:56 | WBPerson1983 | Name_change | CGC_name | Ppa-spe-48 | ||||
| 3 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 28 Jul 2021 11:12:27 | WBPerson1983 | Name_change | CGC_name | Ppa-spe-48 | ||||
| Split_from | WBGene00117807 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | spe | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
| GO_annotation | 00303556 | ||||||||
| 00303557 | |||||||||
| 00303558 | |||||||||
| Ortholog (24) | |||||||||
| Structured_description | Automated_description | Predicted to enable ubiquitin binding activity. Predicted to be involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway. Predicted to be part of ESCRT I complex. Is an ortholog of C. elegans spe-48. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA47270 | |||||||
| Corresponding_transcript | PPA47270.1 | ||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_12569 | |||||||
| GPL14372_Probes_12570 | |||||||||
| GPL14372_Probes_12571 | |||||||||
| GPL14372_Probes_12572 | |||||||||
| GPL14372_Probes_12573 | |||||||||
| Remark | [210528 pad] The CGC name Ppa-spe-48 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
