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WormBase Tree Display for Gene: WBGene00306056

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Name Class

WBGene00306056SMapS_parentSequencePPA_ChrV
IdentityVersion4
NameCGC_namePpa-hgap-1From_analysisInferred_from_orthology
Sequence_namePPA47414
Molecular_namePPA47414
PPA47414.1
PP75881
Public_namePpa-hgap-1
SpeciesPristionchus pacificus
HistoryVersion_change120 Jan 2020 15:19:07WBPerson4055EventSplit_fromWBGene00206300
204 Jun 2020 14:38:21WBPerson1983Name_changeCGC_namePpa-hgap-1
328 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
428 Jul 2021 11:12:28WBPerson1983Name_changeCGC_namePpa-hgap-1
Split_fromWBGene00206300
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhgap
RNASeq_FPKMWBls:000003211.9196From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
3.9732From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00303713
00303714
00303715
00303716
Ortholog (30)
ParalogWBGene00110030Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable GTPase activator activity. Predicted to be involved in regulation of small GTPase mediated signal transduction. Predicted to be located in nucleus. Is an ortholog of C. elegans hgap-1. In C. elegans, hgap-1 is involved in determination of adult lifespan.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA47414
Corresponding_transcriptPPA47414.1
Other_sequence (25)
Experimental_infoMicroarray_resultsGPL14372_Probes_43458
GPL14372_Probes_43459
GPL14372_Probes_43460
Expression_clusterWBPaper00041606:PP_S.marcescens_regulated
WBPaper00041606:PP_X.nematophila_regulated
Remark[210528 pad] The CGC name Ppa-hgap-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene