WormBase Schema for Model: Interaction
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?Interaction | Interaction_type | Physical | UNIQUE | ProteinProtein | ||
---|---|---|---|---|---|---|
ProteinDNA | ||||||
ProteinRNA | ||||||
Predicted | ||||||
Regulatory | Change_of_localization | |||||
Change_of_expression_level | ||||||
Genetic | Genetic_interaction | |||||
Neutral_genetic | ||||||
Synthetic | ||||||
Enhancement | ||||||
Unilateral_enhancement | ||||||
Mutual_enhancement | ||||||
Positive_genetic | ||||||
Suppression | ||||||
Complete_suppression | ||||||
Partial_suppression | ||||||
Unilateral_suppression | ||||||
Complete_unilateral_suppression | ||||||
Partial_unilateral_suppression | ||||||
Mutual_suppression | ||||||
Complete_mutual_suppression | ||||||
Partial_mutual_suppression | ||||||
Suppression_enhancement | ||||||
Asynthetic | ||||||
Negative_genetic | ||||||
Oversuppression | ||||||
Unilateral_oversuppression | ||||||
Mutual_oversuppression | ||||||
Oversuppression_enhancement | ||||||
Phenotype_bias | ||||||
No_interaction | ||||||
Epistasis | ||||||
Positive_epistasis | ||||||
Maximal_epistasis | ||||||
Minimal_epistasis | ||||||
Neutral_epistasis | ||||||
Qualitative_epistasis | ||||||
Opposing_epistasis | ||||||
Quantitative_epistasis | ||||||
GI_module_one | A_phenotypic | |||||
Mono_phenotypic | ||||||
Cis_phenotypic | ||||||
Iso_phenotypic | ||||||
Trans_phenotypic | ||||||
GI_module_two | Enhancing | |||||
Suppressing | ||||||
All_suppressing | ||||||
Super_suppressing | ||||||
Sub_suppressing | ||||||
Inter_suppressing | ||||||
Semi_suppressing | ||||||
Co_suppressing | ||||||
Masking | ||||||
GI_module_three | Neutral | |||||
Non_neutral | ||||||
Positive | ||||||
Negative | ||||||
Converging | ||||||
Diverging | ||||||
Interactor | PCR_interactor | ?PCR_product | XREF | Interaction | #Interactor_info | |
Sequence_interactor | ?Sequence | XREF | Interaction | #Interactor_info | ||
Interactor_overlapping_CDS | ?CDS | XREF | Interaction | #Interactor_info | ||
Interactor_overlapping_gene | ?Gene | XREF | Interaction | #Interactor_info | ||
Interactor_overlapping_protein | ?Protein | XREF | Interaction | #Interactor_info | ||
Molecule_interactor | ?Molecule | XREF | Interaction | #Interactor_info | ||
Other_interactor | ?Text | #Interactor_info | ||||
Rearrangement | ?Rearrangement | XREF | Interactor | #Interactor_info | ||
Feature_interactor | ?Feature | XREF | Associated_with_Interaction | #Interactor_info | ||
Variation_interactor | ?Variation | XREF | Interactor | #Interactor_info | ||
Interaction_summary | ?Text | #Evidence | ||||
Detection_method (30) | ||||||
Library_info | Library_screened | Text | Int | |||
Origin (2) | ||||||
Regulation_level | Transcriptional | |||||
Post_transcriptional | ||||||
Post_translational | ||||||
Regulation_result | Positive_regulate | #GR_condition | ||||
Negative_regulate | #GR_condition | |||||
Does_not_regulate | #GR_condition | |||||
Confidence | Description | Text | ||||
P_value | UNIQUE | Float | ||||
Log_likelihood_score | UNIQUE | Float | ||||
Throughput | UNIQUE | High_throughput | ||||
Low_throughput | ||||||
Interaction_RNAi | ?RNAi | XREF | Interaction | |||
Interaction_phenotype | ?Phenotype | XREF | Interaction | |||
Unaffiliated_variation | ?Variation | |||||
Unaffiliated_transgene | ?Transgene | |||||
Unaffiliated_antibody | ?Antibody | |||||
Unaffiliated_expr_pattern | ?Expr_pattern | |||||
Unaffiliated_construct | ?Construct | |||||
WBProcess | ?WBProcess | XREF | Interaction | |||
DB_info | Database | ?Database | ?Database_field | ?Text | ||
Paper | ?Paper | XREF | Interaction | |||
Antibody_remark | ?Text | |||||
Historical_gene | ?Gene | Text | ||||
Remark | ?Text | #Evidence |