WormBase Tree Display for RNAi: WBRNAi00078673
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WBRNAi00078673 | Homol | Homol_homol | C06A1:RNAi | ||
---|---|---|---|---|---|
CHROMOSOME_II:RNAi | |||||
Sequence_info | DNA_text | atggcctcggttccaacgcatcaaagcgaaaaagagaagaaaaatgatgagctgtcgacagctattctcaaggacaaggtaaagccgaatcgcttgatcgtcgatcagtccgagcaggatgataattccgtcatcgcagtttcccaagctaaaatggacgaactgggacttttccgtggagatgctgtcatcctgaagggaaagaagcgaaaggaatctgtcgccatcattgtctctgatgagtcctgtccaaacgagaaagttcgcatgaaccgtgttgtccgcaacaatcttcgtattcgcctcggagacgtcgtgagcattacgccagctccaaatctcagttacggaacccgcattcacgtgctccctattgatgacactatcgaaggactcactggaaacttgttcgatgttttcctcaagccatacttcctggaggcttaccgcccacttcacaagggagatatattcactgttcaagctgccatgagaactgtggaattcaaagttgtcgaaactgagccagctccagcctgcattgtgtcacctgataccatgattcactacgaaggagatccgatcaagagagaagaagaagaagagagcatgaatgatattggttatgatgacttgggaggagttcggaagcaattggctcagatcaaggaaatggttgaactgccacttcgacatccccaacttttcaaggctattggtatcaagccaccacgtggaattcttctcttcggtccacctggcacaggaaagactcttattgcacgtgctgttgctaatgaaaccggatctttcttcttccttatcaacggacctgaagtaatgtcaaagatgtctggagaatccgagtcaaatcttcgtaaggctttcgaagaatgcgagaagaatcaaccagctattctgtttattgacgaaattgacgccattgcaccaaaacgcgagaagaccaatggagaagttgagcgcagaattgtttctcaattgcttacacttatggatggagtcaagggtcgttctaaccttgtggtcattgctgcaacaaatcgtccaaactcgattgacggtgctcttcgtcgcttcggaagattcgatcgtgaaatcgatatcggaattccagatgcagtcggccggcttgagattctgcgcattcacacgaaaaacatgaagctcgcggatgatgttgatcttgaacaaattgcaaatgaatgtcacggattcgttggtgccgatttggcatcgttgtgctcggaagccgctcttcaacagattcgtgaaaagatggagctcattgatctcgaagatgaccaaattgatgcagaggttcttaattcactcgctgtcacaatggaaaacttccgttttgctcaaggaaagtcttccccatccgctctccgcgaggctgttgtcgaaactccgaatacaacttggtccgacattggaggtcttcaaaacgtcaagcgcgaacttcaagaattggttcagtatccagtggaacacccagaaaaatatctcaagtttggaatgcagccatcaagaggagttttgttctatgggccaccaggatgtggtaagacacttcttgccaaggcaattgccaacgagtgtcaagccaatttcatctccatcaagggtccagaattgctcacaatgtggttcggagaatcggaagctaacgtccgtgatgtcttcgacaaggctcgtgcagctgctccttgcgtgttgttcttcgatgagttggattcgattgccaaggcaagaggtggaggcgccggcggtgatggaggaggtgcatcggatcgtgtaatcaatcaagtgctcaccgaaatggatggaatgaacgcgaagaaaaatgtgttcatcatcggagctacaaacagacctgatatcattgatccagctgttcttcgtccaggtcgccttgatcagcttatctacatcccactcccagacgaagcttctcggcaccaaattttgaaagcttctcttcgtaaaaccccactctccaaggatcttgacttgaccttcttggccaaaaacactgttggattctctggagccgatttgaccgaaatttgtcagagagcgtgtaagctggctattcgcgaatcgatcgaaaaggaaattcggattgagaaggaacgtcaagatcgccaagctcgcggtgaggagctcatggaagacgatgcagttgatccagtaccagaaattactcgtgctcacttcgaggaagccatgaagtttgccagacgctctgttacagacaatgacatcagaaagtacgaaatgtttgcacaaacattgcaacaatctcgtggctttggaaacaacttcaaattcccaggagaacaacgcggaagcgatgccccatctgcccctgtacctgctcaggatgatgacgacctttataactaa | |||
atggcctcagttccgactcagagagacgagaaggaaaagaagaatgatgagctggctacggctatcttgaaagacaaaaaacgcccaaacagactcattatcgatcagtctgacaatgacgacaactccatggtcatgctctcacaggccaaaatggacgagctgggactcttccgtggagattcggtgattttgaaaggaaagaaacgaagagagactgtctctatcgttcttaatgcggacaattgcccgaatgacaagatcaagatgaacaaagtggttcgaaacaacctcagaagccgtcttggagacgttgtcagtatctcaagtgctcaactcgaatatggaaaaagggttcatgttcttccaattgatgacacaatcgagggattgactggaaatctatttgatgtcttccttcggccatactttaccgacgcctaccgcccagtgcacaagggagacatattcactgttcaagctgcaatgagaactgtcgagttcaaagttgtcgagacggatcctgctccggcgtgtattgttgctccagatactgttattcactatgaaggagatccaattaaaagagaggaagaagaggaggctctcaatgaagttggatacgatgatctcggaggtgttcgtaaacaactcgctcagatcaaggaaatggttgagctcccacttcgccatccccaacttttcaaggctatcggagtgaaaccaccacgtggaattcttctgttcggtccaccaggaaccggtaagacactgatcgcaagagctgtcgccaacgaaacaggagcattcttcttcctcattaacggaccggaaattatgtctaaaatgtctggagagtcggaatcgaatcttcgtaaagcatttgccgagtgtgagaagaactcacctgctattttgttcattgacgagatcgatgcgattgctccaaagagagaaaaggctcacggtgaagtcgagaagcgtatcgtctcgcaacttctcacacttatggatggacttaaaactcgcgctcatgttgtcgtgatcgccgctactaatcgtcctaactctattgatggagcccttcgtcgtttcggtcgctttgatcgtgaaattgacattggaatccctgatgctgttggccgtctggaaattctcagaattcataccaagaacatgaaattaggagaagacgttgatttggaacaagttgcaaacgaatgccacggatttgtcggagctgatttggcttccctctgctctgaggctgctattcagcaaattcgcgaaaagatggagctgattgatttggaggatgatacaattgatgctgaagttctcaattctttggcggtcactatggagaactttagattcgcaatgggaaaatcatccccatctgctcttcgcgaagccgttgtggaaactccaaatactacttggtccgacatcggaggtcttcaaaacgtcaagcgcgaacttcaggagctcgttcaataccctgtagagcatccagaaaagtatctcaagttcggaatgcaaccatctcgtggagttttgttctacggtccaccaggatgcggtaaaacacttctcgctaaagcgattgccaatgaatgccaggctaacttcatttccatcaagggacccgagcttcttactatgtggttcggagaatccgaagctaatgttcgcgacgtgtttgataaagctcgtgctgccgctccatgcgttctcttctttgacgaactcgattcgatcgcaaaggccagaggaggaagtgtaggagatgctggaggtgctgccgatcgtgttatcaaccaggttctcactgaaatggatggtatgaatgccaagaaaaacgtgttcattattggagctaccaatcgtcctgatatcattgatccagctgttcttcgtccaggacgtctcgatcagttgatctacattcctcttcctgacgaagcatctagacttcaaattttcaaggcctcactccgcaaaacgcccctttccgccgatctcgatttgaacttccttgccaagaacaccgtcggtttttcgggagccgacttaaccgaaatttgccaaagagcatgcaagcttgccattcgtgaatcaattgaacgggaaattcgtcaggaaaaggagcgtcaggacagaagtgctcgtggagaagaacttatggaggatgaactggctgacccagttccagaaataactagagcacacttcgaggaggcaatgaagttcgctagacgttccgtgactgataacgatatcagaaaatacgagatgttcgcccagactcttcaacaatctcgtggatttggaaacaacttcaagttcccaggagaagctccttctgctggacaacctgttggaggaaacggtggctccggtggaaatgacgatgatgacctgtacaactag | |||||
Experiment | Laboratory | PP | |||
Date | 09 Feb 2007 00:00:00 | ||||
Genotype | hsp-4::GFP | ||||
Treatment | Worms expressing GFP under the control of the UPR-inducible hsp-4 promoter were assayed for expression under non-stress conditions. | ||||
Temperature | 15 | ||||
Inhibits | Predicted_gene | C06A1.1 | Inferred_automatically | RNAi_primary | |
C41C4.8 | Inferred_automatically | RNAi_primary | |||
Gene | WBGene00008053 | Inferred_automatically | RNAi_primary | ||
WBGene00007352 | Inferred_automatically | RNAi_primary | |||
Transcript | C41C4.8.1 | Inferred_automatically | RNAi_primary | ||
C06A1.1.1 | Inferred_automatically | RNAi_primary | |||
Species | Caenorhabditis elegans | ||||
Reference | WBPaper00029196 | ||||
Phenotype | WBPhenotype:0001719 | Remark | UPR is induced as determined by the expression of GFP under the control of the UPR-inducible hsp-4 promoter. Under these condtions, control worms do not express GFP. | ||
Remark | Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. | ||||
Method | RNAi |