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WormBase Tree Display for RNAi: WBRNAi00085171

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Name Class

WBRNAi00085171HomolHomol_homolF53G12:RNAi
W04G5:RNAi
Sequence_infoPCR_productsjj_F53G12.1
ExperimentLaboratoryHY
Date20 Dec 2010 00:00:00
Genotypeunc-119(ed3) [opt-2::GFP::pgp-1, unc-119(+)]
TreatmentFor determination of endocytosis after RNAi treatment, PGP-1::GFP animals were synchronized to the L1 stage by hypochlorite treatment and overnight starvation in M9 media at room temperature and then seeded onto RNAi plates and grown to the L4 stage at 20C, before being exposed to OP50-Cry5B for 2 hr at 20C. 1:10 dilutions of rab-11.1 RNAi were made by combining one part RNAi culture with nine parts pL4440 (empty vector) bacteria
Delivered_byBacterial_feeding
InhibitsPredicted_geneF53G12.1Inferred_automaticallyRNAi_primary
GeneWBGene00004274Inferred_automaticallyRNAi_primary
TranscriptF53G12.1.1Inferred_automaticallyRNAi_primary
SpeciesCaenorhabditis elegans
ReferenceWBPaper00038144
PhenotypeWBPhenotype:0000679
WBPhenotype:0001422RemarkRNAi causes significant inhibition of Cry5B-induced endocytic response, as indicated by the PGP-1::GFP transgene
RemarkAuthors note that the rab-11.1 RNAi clone was a gift from Barth Grant. Ahringer clone used for curation. Authors also note that due to the sequence similarity with rab-11.2, this clone likely also knocks down levels of rab-11.2
MethodRNAi