WormBase Tree Display for RNAi: WBRNAi00099081
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| WBRNAi00099081 | Homol | Homol_homol | CHROMOSOME_III:RNAi | ||
|---|---|---|---|---|---|
| Sequence_info | DNA_text | TGGATGTGGATTGCGCAGAAACATTCTCGCAACCATGCACTCCGCTGAATTTCAATCCGATGACTCCGTCAACATCGAGAGTTTCAACACCAGTTCGGCCGTCTTCTACAATGTCTGCCAGACAATATTCAGGTTCGCCGTTCAAGGCTCAACCTCAGAACATGGAACCGTCCAATTCTCGGGTGCAAGAACTCCGGGAAGCTGCTGTGGGAAAGCGATCATACACAAATGCTTGGATGCAGGGTACCTATGCACCGCCGCAGATGGCAGGACAACAACAAAGGTTTTCGAGGCCTCCGAGTGTGATCGGCTCCACAATGTCTCACATGACGAATATGTCAGAAATGACCGCCTACTCGTACGGTGGATTGTCAATGCTCTCAGTCAACACTGAAATGGGTGAATTCAACAATTTTGTCAATCAGGCACCATATCAGCGAGCACTGACACGTGTATCGCAGGTTTCCGAGAATCAGGATCCGACGAATCGACAGTATCCGATGACAGCTCCCGAGATTATTGAGAATCTGGAATCAACGGAACTAATCAATCAAGCAGCAGCGATTCGAGCTTTGGAGCCAATTGTGAAAGCTGGTGGAATGTTGCAAACCTGGGGACCTAAAGGAGCCGAACCGATTATTCGAGCTCTGTTTCAAGTTCTTATTCCTCGGCCAGTTGAGAATGAGAATGTAATCCGGAAAGCGTTTGAAATTCTCCACCACTCAATTCTTCTCTCCAACAAGGAAATCCGACGTATCGACAGGATGTTCTTCCGACTGAATGCGGCATTAATGGATCCCAATGGGCCGCCTGTGTTCAATGTACCAAAGCCATACAGTATCTATGAGATCGTGATGACACGTGCCATTCAACTTGACACGAAATTCGAGTCCAGTGCTATGGTTCTGCTCGTACATCTTTGTTGTAAACCTCATTTCATGAAGATTTTCTTTGGAGAAGATGAGACTCAACAGTCACCAGCACATCGACGTCTTCACAAAATAGTAATTGAATTTGCAATTGGAAACCTGAGAAGACCGGAAACGAAGTCAAAGAATAAGGGACTTTGTGTATCGATTATTAAGAATTTGTCGAATAAAAATGCAACTATCAAAGATATGTCAGAACGTCTTGGTGTTGTGAGCCTCTTTCATCAAATTATGCAGAACGAAGTGATCCACGAGGATTTGTTGTGGTCAACGATGCAGGCTCTTACCGTATTCTGTGGAGATGTTAAGAATGGAACACATTTTGTGCAAATGGGTGGAGCACAAGTTTTGTGCGGTCTTCTTTCGCATGGATCAACACGACTTCTTCACGAACTTCTGAAGTGTTTGAGACGAGTATCAGATTTGCCAGCGATCCAGGAGCAGGATATGAAAGAATCGATTCATTGTATAGTTCAACTTATTGGATGTTCGGATGTAACGATTGTTGAGCTAGCGACTGGAACTCTACGAAATATTGGACTTCATAACAAGATGAACAAGGCATTTATGGTGCAGGATGGAGTTACAAGTCATGCGATCGCAGTTCTTCGGACATCTGAACAGTTTACATATCAGCCACATGCCAATATAGATTTATATAGAAAGCAGATTCTGTCGATTTATGAAAATTGTCTATCCGTATTGAACAATGTGACTTCTATGGCACCTCAAGATATCAAAGAATCTGCAGTATCAGCGTGTAGAATGATCAGTGAGAATGCCGACTCCGCATATGTGCTCCTTCATTACTTTAACGTTGGAAATCGGAAGTGCAGGAAACTTGCGGTGACAGTAATGAAACGTGTCATTGAGACGGTTCCTGCTTTTGCTGATCCGTTTGTTGATCTACTTGGAACAACAAATGAGCCACTACCAATTTTATTGCTTCAAAGAGCATTCCAGAGTTTGGACGAATGGCGGAAAACTAGCGTTGAAATGATGAATTGTGACGGTAGAAGTGCTGAGCAGAGAAGAGAATTAGATGACAGACGAAAAGATCACGAAGATATTGTAAAACGATCTGTGGGACTTTTAACGAATCTTTGTAGTCAGGCAAATCCAAGATTTTTCCACAGTTTGAAGCTAGTATTGACAAATGGCACGCTAAACCCCTTCCAATGGCTGACACATGAGATGAGTGACGGTATTCTGCAAGAGTGGCTAGCATTCATTTTGTCAATTTGTAGTCGTGACGAGTCACTGCAAACTTTTATGATGTACAGATTCCTGGAACAGGCAAAAATGACTGAAGCATTCTTTGCGGAACTCAAGGCTCGTCGGCAGAATTCGAATATTCAAACTATGTTGTCAAAGATCATCGATCTTGGTAGACATCAGCAGAGAATAGTTTCACAACAACATCAACAGCATCAAATGCAGCATCATCGACAACTAATGTGA | |||
| Experiment | Laboratory | TX | |||
| Date | 11 Apr 2011 00:00:00 | ||||
| Genotype | Pmed-1gfp::htcf4/pop-1(II+V) | ||||
| Inhibits | Predicted_gene | B0336.1a | Inferred_automatically | RNAi_primary | |
| B0336.1b | Inferred_automatically | RNAi_primary | |||
| Gene | WBGene00006943 | Inferred_automatically | RNAi_primary | ||
| Transcript | B0336.1b.1 | Inferred_automatically | RNAi_primary | ||
| B0336.1a.1 | Inferred_automatically | RNAi_primary | |||
| Species | Caenorhabditis elegans | ||||
| Reference | WBPaper00038377 | ||||
| Phenotype | WBPhenotype:0000104 | Remark | wrm-1(RNAi) in a transgenic strain expressing hTCF4/POP-1(II+V) causes the A-P asymmetric pattern of GFP::hTCF4/POP-1(II+V) fluorescence to be abolished in This shows a requirement of WRM-1 for A-P asymmetry and suggests that GFP::hTCF4/POP-1(II+V) responds to the Wnt/MAPK signal in the E blastomere by undergoing nuclear export following LIT-1 phosphorylation. htcf4/pop-1(II+V) codes for a chimeric proteins in which aa 54-327 of hTCF4 was replaced with aa 47-191 of POP-1. | ||
| WBPhenotype:0000961 | Remark | wrm-1(RNAi) in a transgenic strain expressing hTCF4/POP-1(II+V) causes the A-P asymmetric pattern of GFP::hTCF4/POP-1(II+V) fluorescence to be abolished in This shows a requirement of WRM-1 for A-P asymmetry and suggests that GFP::hTCF4/POP-1(II+V) responds to the Wnt/MAPK signal in the E blastomere by undergoing nuclear export following LIT-1 phosphorylation. htcf4/pop-1(II+V) codes for a chimeric proteins in which aa 54-327 of hTCF4 was replaced with aa 47-191 of POP-1. | |||
| Remark | htcf4/pop-1(II+V) codes for a chimeric proteins in which aa 54-327 of hTCF4 was replaced with aa 47-191 of POP-1. Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. | ||||
| Method | RNAi |
