WormBase Tree Display for RNAi: WBRNAi00102864
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| WBRNAi00102864 | Homol | Homol_homol | Y55D5A:RNAi | ||
|---|---|---|---|---|---|
| Sequence_info | DNA_text | ATGACGAGAATGAATATTGTCAGATGTCGGAGACGACACAAAATTTTGGAAAATTTGGAAGAAGAGAATCTCGGCCCGAGCTGCTCGTCGACGACTTCAACAACCGCTGCCACCGAAGCTCTCGGAACAACCACTGAGGATATGAGGCTTAAGCAGCAGCGAAGCTCGTCGCGTGCCACGGAGCACGATATTGTCGACGGCAATCACCACGACGACGAGCACATCACAATGAGACGGCTTCGACTTGTCAAAAATTCGCGGACGCGGCGTAGAACGACGCCCGATTCAAGTATGGACTGCTATGAGGAAAACCCGCCATCACAAAAAACTTCAATAAATTATTCTTGGATTTCTAAAAAGTCATCAATGACGTCATTAATGCTTTTACTGCTATTCGCTTTTGTACAGCCGTGTGCCTCAATAGTCGAAAAACGATGCGGCCCAATCGATATTCGAAATAGGCCGTGGGATATTAAGCCGCAATGGTCGAAACTTGGTGATCCGAACGAAAAAGATTTGGCTGGTCAGAGAATGGTCAACTGCACAGTGGTGGAAGGTTCGCTGACAATCTCATTTGTACTGAAACACAAGACAAAAGCACAAGAAGAAATGCATCGAAGTCTACAGCCAAGATATTCCCAAGACGAATTTATCACTTTTCCGCATCTACGTGAAATTACTGGAACTCTGCTCGTTTTTGAGACTGAAGGATTAGTGGATTTGCGTAAAATTTTCCCAAATCTTCGTGTAATTGGAGGCCGTTCGCTGATTCAACACTATGCGCTGATAATTTATCGAAATCCGGATTTGGAGATCGGTCTTGACAAGCTTTCCGTAATTCGAAATGGTGGTGTACGGATAATCGATAATCGAAAACTGTGCTACACGAAAACGATTGATTGGAAACATTTGATCACTTCTTCCATCAACGATGTTGTCGTTGATAATGCTGCCGAGTACGCTGTCACTGAGACTGGATTGATGTGCCCACGTGGAGCTTGCGAAGAGGATAAAGGCGAATCAAAGTGTCATTATTTGGAGGAAAAGAATCAGGAACAAGGTGTCGAAAGAGTTCAGAGTTGTTGGTCGAACACCACTTGCCAAAAGTCTTGTGCTTATGATCGTCTTCTTCCAACGAAAGAAATCGGACCGGGATGTGATGCGAACGGCGATCGATGTCACGATCAATGCGTGGGCGGTTGTGAGCGTGTGAATGATGCGACAGCATGCCACGCGTGCAAGAATGTCTATCACAAGGGAAAGTGTATCGAAAAGTGTGATGCTCACCTGTACCTTCTCCTTCAACGTCGTTGTGTGACCCGTGAGCAGTGTCTGCAGCTGAATCCGGTGCTCTCGAACAAAACAGTGCCTATCAAGGCGACGGCAGGCCTTTGCTCGGATAAATGTCCCGATGGTTATCAAATCAACCCGGATGATCATCGAGAATGCCGAAAATGCGTTGGCAAGTGTGAGATTGTGTGCGAGATCAATCACGTCATTGATACGTTTCCGAAGGCACAGGCGATCAGGCTATGCAATATTATTGACGGAAATCTGACGATCGAGATTCGCGGAAAACAGGATTCGGGAATGGCGTCCGAGTTGAAGGATATATTTGCGAACATTCACACGATCACCGGCTACCTGTTGGTACGTCAATCGTCACCGTTTATCTCGTTGAACATGTTCCGGAATTTACGACGTATTGAGGCAAAGTCACTGTTCAGAAATCTATATGCTATCACAGTTTTTGAAAATCCGAATTTAAAAAAGCTATTCGATTCAACGACGGATTTGACGCTTGATCGTGGAACTGTGTCAATTGCCAATAACAAGATGTTATGCTTCAAGTATATCAAGCAGCTAATGTCAAAGTTAAATATACCACTCGATCCGATAGATCAATCAGAAGGGACAAATGGTGAGAAGGCAATCTGTGAGGATATGGCAATCAACGTGAGCATCACAGCGGTCAACGCGGACTCGGTCTTCTTTAGTTGGCCCTCATTCAACATTACCGATATAGATCAGCGAAAGTTTCTCGGCTACGAGCTCTTCTTCAAAGAAGTCCCACGAATCGATGAGAACATGACGATCGAAGAGGATCGAAGTGCGTGTGTCGATTCGTGGCAGAGTGTCTTCAAACAGTACTACGAGACGTCGAACGGTGAACCGACCCCGGACATTTTTATGGATATTGGACCGCGCGAGCGAATTCGGCCGAATACGCTCTACGCGTACTATGTGGCGACGCAGATGGTGTTGCATGCCGGTGCGAAGAACGGTGTATCGAAGATTGGTTTTGTGAGGACGAGCTACTATACGCCTGATCCTCCGACGTTGGCACTAGCGCAAGTCGATTCGGACGCTATTCATATTACGTGGGAAGCGCCGCTCCAACCGAACGGAGACCTCACGCATTACACAATTATGTGGCGTGAGAATGAAGTGAGCCCGTACGAGGAAGCCGAAAAGTTTTGTACAGATGCAAGCACCCCCGCAAATCGACAACACACGAAAGATCCGAAAGAGACGATTGTAGCCGATAAGCCAGTCGATATTCCGTCATCACGTACCGTAGCTCCGACACTTTTGACTATGATGGGTCACGAAGATCAGCAGAAAACGTGCGCTGCAACGCCCGGTTGTTGTTCGTGTTCGGCTATCGAAGAATCATCGGAACAGAACAAGAAGAAGCGACCGGATCCGATGTCGGCGATCGAATCATCTGCATTTGAGAATAAGCTGTTGGATGAGGTTTTAATGCCGAGAGACACGATGCGAGTGAGACGATCAATTGAAGACGCGAATCGAGTCAGTGAAGAGTTGGAAAAAGCTGAAAATTTGGGAAAAGCTCCAAAAACTCTCGGTGGAAAGAAGCCGCTGATCCATATTTCGAAGAAGAAGCCGTCGAGCAGCAGCACCACATCCACACCGGCTCCAACGATCGCATCAATGTATGCCTTAACAAGGAAACCGACTACGGTGCCGGGAACAAGGATTCGGCTCTACGAGATCTACGAACCTTTACCCGGAAGCTGGGCGATTAATGTATCAGCTCTGGCATTGGATAATAGTTATGTGATACGAAATTTGAAGCATTACACACTTTATGCGATTTCTCTATCCGCGTGCCAAAACATGACAGTACCCGGAGCATCTTGCTCAATATCCCATCGTGCGGGAGCATTGAAACGAACAAAACACATCACAGACATTGATAAAGTGTTGAATGAAACAATTGAATGGAGATTTATGAATAATAGTCAACAAGTCAACGTGACGTGGGATCCACCGACTGAAGTGAATGGTGGAATATTCGGTTATGTTGTAAAGCTTAAGTCAAAAGTCGATGGATCAATTGTTATGACGAGATGTGTCGGTGCGAAGAGAGGATATTCAACACGGAATCAGGGTGTCCTATTCCAGAATTTGGCCGATGGACGTTATTTTGTCTCAGTAACGGCGACCTCTGTACACGGCGCTGGACCGGAAGCCGAATCCTCCGACCCAATCGTCGTCATGACGCCAGGCTTCTTCACTGTGGAAATCATTCTCGGCATGCTTCTCGTCTTTTTGATTTTAATGTCAATTGCCGGTTGTATAATCTACTACTACATTCAAGTACGCTACGGCAAAAAAGTGAAAGCTCTATCTGACTTTATGCAATTGAATCCCGAATATTGTGTGGACAATAAGTACAATGCAGACGATTGGGAGCTACGGCAGGATGATGTTGTGCTCGGACAACAGTGTGGAGAGGGATCATTCGGAAAAGTGTACCTAGGAACTGGAAATAATGTTGTTTCTCTGATGGGTGATCGTTTCGGACCGTGTGCTATTAAGATTAATGTAGATGATCCAGCGTCGACTGAGAATCTCAACTATCTCATGGAAGCTAATATTATGAAGAACTTTAAGACTAACTTTATCGTCAAACTGTACGGAGTTATCTCTACTGTACAACCAGCGATGGTTGTGATGGAAATGATGGATCTTGGAAATCTCCGTGACTATCTCCGATCGAAACGCGAAGACGAAGTGTTCAATGAGACGGACTGCAACTTTTTCGACATAATCCCGAGGGATAAATTCCATGAGTGGGCCGCACAGATTTGTGATGGTATGGCGTACCTGGAGTCGCTCAAGTTTTGCCATCGAGATCTCGCCGCACGTAATTGCATGATAAATCGGGATGAGACTGTCAAGATTGGAGATTTCGGAATGGCTCGTGATCTATTCTATCATGACTATTATAAGCCATCGGGCAAGCGTATGATGCCTGTTCGATGGATGTCACCCGAGTCGTTGAAAGACGGAAAGTTTGACTCGAAATCTGATGTTTGGAGCTTCGGAGTTGTTCTCTATGAAATGGTTACACTCGGTGCTCAGCCATATATTGGTTTGAGTAATGATGAGGTGTTGAATTATATTGGAATGGCCCGGAAGGTTATCAAGAAGCCCGAATGTTGTGAAAACTATTGGTATAAGGTGATGAAAATGTGCTGGAGATACTCACCTCGGGATCGTCCGACGTTCCTCCAGCTCGTTCATCTTCTAGCAGCTGAAGCTTCACCAGAATTCCGAGATTTATCATTTGTCCTAACCGATAATCAAATGATCCTTGACGATTCAGAAGCACTGGATCTTGATGATATTGATGATACTGATATGAATGATCAGGTTGTCGAGGTGGCACCGGATGTTGAGAACGTCGAGGTTCAGAGTGATTCGGAACGTCGGAATACGGATTCAATACCGTTGAAACAGTTTAAGACGATCCCTCCGATCAATGCGACGACGAGTCATTCGACAATATCGATTGATGAGACACCGATGAAAGCGAAGCAGCGAGAAGGATCGCTGGATGAGGAGTACGCATTGATGAATCATAGTGGAGGTCCGAGTGATGCGGAAGTTCGGACGTATGCTGGTGATGGAGATTATGTGGAGAGAGATGTTCGAGAGAATGATGTGCCAACGCGACGAAATACTGGTGCATCAACATCAAGTTACACAGGTGGTGGTCCATATTGCCTAACAAATCGTGGTGGTTCAAATGAACGAGGAGCCGGTTTCGGTGAAGCAGTACGATTAACTGATGGTGTTGGAAGTGGACATTTAAATGATGATGATTATGTTGAAAAAGAGATATCATCCATGGATACGCGCCGGAGCACGGGCGCCTCGAGCTCTTCCTACGGTGTTCCACAGACGAATTGGAGTGGAAATCGTGGTGCCACGTATTATACGAGTAAAGCTCAACAGGCAGCAACTGCAGCAGCAGCAGCAGCAGCAGCTCTCCAACAGCAACAAAATGGTGGTCGAGGCGATCGATTAACTCAACTACCCGGAACTGGACATTTACAATCGACACGTGGTGGACAAGATGGAGATTATATTGAAACTGAACCGAAAAATTATAGAAATAATGGATCTCCATCGCGAAACGGCAACAGCCGTGACATTTTCAACGGACGTTCGGCTTTCGGTGAAAATGAGCATCTAATCGAGGATAATGAGCATCATCCACTTGTCTGA | |||
| Experiment | Date | 29 Nov 2013 00:00:00 | |||
| Genotype | daf-16(mu86) | ||||
| Treatment | Individual worms were placed on RNAi bacterial feeding plates and allowed to self-fertilize at 20 degrees Celsius. The life spans of the worms were assayed at 20 degrees Celsius. The L4 stage hermaphrodites were transferred to fresh plates daily or at 2-day intervals until they stopped laying eggs. If the worms failed to move when prodded or if they lacked pharyngeal pumping, the worms were scored as dead. If a worm crawled off the plate, it was excluded from the assay. The analyses were repeated three times. Statistical analyses were conducted using the software OASIS. | ||||
| Temperature | 20 | ||||
| Delivered_by | Bacterial_feeding | ||||
| Inhibits | Predicted_gene | Y55D5A.5e | Inferred_automatically | RNAi_primary | |
| Y55D5A.5g | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5f | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5c | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5d | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5a | Inferred_automatically | RNAi_primary | |||
| Gene | WBGene00000898 | Inferred_automatically | RNAi_primary | ||
| Transcript | Y55D5A.5g.1 | Inferred_automatically | RNAi_primary | ||
| Y55D5A.5e.1 | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5b | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5f.1 | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5a.1 | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5c.1 | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5d.1 | Inferred_automatically | RNAi_primary | |||
| Species | Caenorhabditis elegans | ||||
| Interaction | WBInteraction000525124 | ||||
| Reference | WBPaper00044873 | ||||
| Phenotype_not_observed | WBPhenotype:0000039 | Remark | daf-2 RNAi did not affect life span in the daf-16(mu86) mutant background | ||
| Remark | (Figure 4B) daf-2 RNAi. Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. | ||||
| Method | RNAi |
