WormBase Tree Display for Sequence: C25G4

C25G4 DNA: C25G4 33706
  SMap: S_child: Gene_child (13)
      CDS_child: C25G4.2 5116 4350
        C25G4.3:wp165 6141 5620
        C25G4.3a 6966 5620
        C25G4.3b 6141 5620
        C25G4.4 15163 13367
        C25G4.5 12372 7284
        C25G4.6 16274 17199
        C25G4.7:wp168 18275 19643
        C25G4.7a:wp243 18042 19643
        C25G4.7b 18042 18229
        C25G4.7c:wp243 18042 19430
        C25G4.8 24494 20901
        C25G4.8:wp204 24494 20901
        C25G4.10b 29752 31270
        C25G4.11:wp201 29752 31270
        C25G4.17 3178 4117
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g184_x25_IV_p 556 657
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g27n11_x25t1_IV_m 5116 4353
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g36n11e2k210_x25_IV_p 30825 31267
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g41n11_x25_IV_m 12372 7287
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g50n11_x25_IV_m 6141 5623
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g129_x25_IV_p 16546 16614
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g36n11_x25_IV_p 29752 32585
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g96n11_x25_IV_m 15163 14355
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g50n12_x25_IV_m 6966 5623
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g157_x25_IV_p 19273 19365
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g94n11_x25_IV_m 14556 13370
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g8n11_x25_IV_p 29752 32585
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g46n11_x25_IV_m 12372 10500
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g8n11e2k211_x25_IV_p 30825 31267
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g30n11_x25_IV_m 6966 5623
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g3n11_x25_IV_m 5116 4353
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g56_x25_IV_m 10457 7287
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g165_x25_IV_m 15008 14847
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g80_x25_IV_p 3178 4114
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g4n11e2k287_x25_IV_p 30825 31267
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g58n11_x25_IV_m 12372 7287
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g127_x25_IV_m 13792 13616
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g10n11_x25_IV_m 5116 4353
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g76_x25_IV_p 3178 4114
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g4n11_x25_IV_p 29752 32585
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g33n11_x25_IV_m 6966 5635
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g10n11_x25_IV_p 29752 32116
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g58_x25_IV_p 32387 32579
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g9n11_x25_IV_m 5116 4353
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g88_x25_IV_m 6966 5644
        RNASEQ_embryo_him-8_20dC_post-L1_g18n11_x25_IV_m 5116 4353
        RNASEQ_embryo_him-8_20dC_post-L1_g20n11e2k128_x25_IV_p 30825 31267
        RNASEQ_embryo_him-8_20dC_post-L1_g37n11_x25_IV_m 6966 5623
        RNASEQ_embryo_him-8_20dC_post-L1_g30n11_x25_IV_m 12372 7287
        RNASEQ_embryo_him-8_20dC_post-L1_g20n11_x25_IV_p 29752 32579
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g48n11_x25_IV_m 12372 7287
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g39_x25_IV_m 24494 20934
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g122e6k52_x25_IV_p 19254 19427
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g58_x25_IV_m 15163 13370
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g26n11e2k214_x25_IV_p 30825 31267
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g122_x25_IV_p 18820 19640
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g17_x25_IV_p 16274 17196
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g18n11_x25_IV_m 5116 4353
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g26n11_x25_IV_p 29752 32582
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g40n11_x25_IV_m 6966 5623
        RNASEQ_L4_soma_JK1107_no_DNaseI_g85_x25_IV_m 8374 7287
        RNASEQ_L4_soma_JK1107_no_DNaseI_g25n11_x25_IV_m 5116 4353
        RNASEQ_L4_soma_JK1107_no_DNaseI_g145_x25_IV_p 16337 16500
        RNASEQ_L4_soma_JK1107_no_DNaseI_g104_x25_IV_p 31950 32579
        RNASEQ_L4_soma_JK1107_no_DNaseI_g67n11_x25_IV_m 12372 12012
        RNASEQ_L4_soma_JK1107_no_DNaseI_g131_x25_IV_m 10292 9535
        RNASEQ_L4_soma_JK1107_no_DNaseI_g162_x25_IV_m 11185 10605
        RNASEQ_L4_soma_JK1107_no_DNaseI_g28n11_x25_IV_p 29752 31267
        RNASEQ_L4_soma_JK1107_no_DNaseI_g41n11_x25_IV_m 6966 5623
        RNASEQ_L4_soma_JK1107_no_DNaseI_g163_x25_IV_m 11875 11816
        RNASEQ_L4_soma_JK1107_no_DNaseI_g200_x25_IV_p 1717 1764
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g16n11e2k214_x25_IV_p 30825 31267
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g31n11_x25_IV_m 6966 5623
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g51n11_x25_IV_m 12372 7287
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g6n11_x25_IV_m 5116 4353
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g16n11_x25_IV_p 29752 32585
        RNASEQ_early_embryo_g40n12_x25_IV_m 6966 5623
        RNASEQ_early_embryo_g136_x25_IV_m 14411 14355
        RNASEQ_early_embryo_g123_x25_IV_m 14004 13370
        RNASEQ_early_embryo_g13n11e2k287_x25_IV_p 30825 31267
        RNASEQ_early_embryo_g40n11_x25_IV_m 6141 5623
        RNASEQ_early_embryo_g60n11_x25t1_IV_m 5116 4353
        RNASEQ_early_embryo_g13n11_x25_IV_p 29752 32585
        RNASEQ_early_embryo_g13n11s2k80_x25_IV_p 31881 31951
        RNASEQ_early_embryo_g125_x25_IV_m 14839 14626
        RNASEQ_early_embryo_g28n11_x25t1_IV_m 12372 7287
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g28n11e2k265_x25_IV_p 30825 31267
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g28n11_x25_IV_p 29752 32585
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g25n11_x25t1_IV_m 12372 7287
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g38n11_x25t1_IV_m 5116 4353
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g57n11_x25t1_IV_m 6966 5623
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g65n12_x25t1_IV_m 6966 5623
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g185_x25_IV_p 52 253
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g19n11_x25t1_IV_m 5116 4353
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g43n11_x25t1_IV_m 12372 7287
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g65n11_x25t1_IV_m 6141 5623
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g32n11_x25_IV_p 29752 32597
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g32n11e2k236_x25_IV_p 30825 31267
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g116_x25_IV_p 1002 1664
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g132_x25_IV_p 1717 1812
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g57n11_x25_IV_p 29752 32582
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g53_x25_IV_m 12173 7287
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g22n11_x25t1_IV_m 5116 4353
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g50n11_x25_IV_m 6966 5623
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g57n11e2k113_x25_IV_p 30825 31267
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g102_x25_IV_m 15163 13370
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g146_x25_IV_p 18820 18948
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g86_x25t1_IV_m 12173 7287
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g136_x25_IV_p 16274 16677
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g50_x25_IV_p 30917 32582
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g135_x25_IV_p 16681 16857
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g50e2k219_x25_IV_p 30917 31267
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g29n11_x25t1_IV_m 5116 4353
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g58n11_x25t1_IV_m 6966 5623
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g131_x25_IV_m 21475 21162
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g132_x25_IV_p 31881 32528
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g110_x25_IV_m 6141 5623
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g134_x25_IV_m 14394 13604
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g79_x25_IV_p 18042 18223
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g104_x25t1_IV_m 12173 7287
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g123_x25_IV_p 30917 31237
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g116_x25_IV_m 24494 23770
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g36n11_x25t1_IV_m 5116 4353
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g147_x25_IV_p 19293 19640
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g107_x25_IV_m 15163 14488
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g28_x25_IV_p 16274 17196
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g145_x25_IV_m 23760 21716
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g80n11_x25_IV_m 12173 11939
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g129_x25_IV_p 16274 16503
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g105n11_x25_IV_m 15163 13370
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g49n11_x25_IV_m 5116 4353
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g164_x25_IV_p 16696 16857
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g27n11_x25_IV_p 29752 32582
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g30n12_x25_IV_m 6966 5623
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g16n11_x25_IV_m 12372 7287
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g30n11_x25_IV_m 6141 5623
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g38n11_x25_IV_m 6141 5638
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g8n11e2k142_x25_IV_p 30825 31267
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g51n11_x25_IV_m 5116 4353
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g91n11_x25_IV_m 15163 13370
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g38n12_x25_IV_m 6966 5635
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g8n11_x25_IV_p 29752 32594
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g13n11_x25_IV_m 12372 7287
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g128_x25_IV_p 16274 16587
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g55n11_x25_IV_m 5116 4353
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g23n11_x25_IV_p 29752 32585
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g23n11e2k136_x25_IV_p 30825 31267
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g110_x25_IV_m 15163 13370
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g202_x25_IV_p 18176 18223
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g27n11_x25_IV_m 12372 7287
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g30n11_x25_IV_m 6966 5623
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g176_x25_IV_p 16684 16812
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g160_x25_IV_p 19297 19389
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g23n11_x25_IV_m 6141 5623
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g150_x25_IV_p 16361 16512
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g19n11e2k216_x25_IV_p 30825 31267
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g25n11_x25_IV_m 12372 7287
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g116n11_x25_IV_m 15163 13370
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g169_x25_IV_p 18042 18223
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g23n12_x25_IV_m 6966 5623
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g155_x25_IV_p 19343 19390
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g19n11_x25_IV_p 29752 32582
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g20n11_x25_IV_m 5116 4353
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g171_x25_IV_p 18856 18966
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g149_x25_IV_p 19293 19340
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g41n11_x25t1_IV_m 5116 4353
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g141_x25_IV_m 23760 21662
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g159_x25_IV_m 21144 20983
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g53_x25_IV_p 16274 17196
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g156_x25_IV_p 18219 18747
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g84n11_x25_IV_p 29752 32585
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g142_x25_IV_m 24176 24046
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g139_x25_IV_p 18820 19074
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g133_x25_IV_p 18042 18181
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g98n11_x25_IV_m 15163 13370
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g135_x25_IV_m 21475 21174
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g47n11_x25t1_IV_m 6966 5623
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g84n11e2k238_x25_IV_p 30825 31267
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g40n11_x25_IV_m 12372 7287
        C25G4.gc1 90 4117
        C25G4.gc2 5116 4350
        C25G4.gc3 6966 5620
        C25G4.gc4 12372 7284
        C25G4.gc5 15163 13367
        C25G4.gc6 16274 17199
        C25G4.gc7 18275 19643
        C25G4.gc8 26213 20901
        C25G4.gc9 29752 33560
        ContigIV.elegans.jigsaw.2553.mRNA2553 17922 19688
        ContigIV.elegans.jigsaw.2550.mRNA2550 12471 7064
        ContigIV.elegans.jigsaw.2555.mRNA2555 29722 31382
        ContigIV.elegans.jigsaw.2551.mRNA2551 15321 13148
        ContigIV.elegans.jigsaw.2548.mRNA2548 5161 4316
        ContigIV.elegans.jigsaw.2554.mRNA2554 24550 20781
        ContigIV.elegans.jigsaw.2552.mRNA2552 15549 17258
        ContigIV.elegans.jigsaw.2549.mRNA2549 6966 5534
        AG1201_C25G4.1.T1 3178 4117
        AG1201_C25G4.2.T1 5116 4350
        AG1201_C25G4.3.T2 6141 5620
        AG1201_C25G4.3.T1 6966 5620
        AG1201_C25G4.3.T4 6966 5620
        AG1201_C25G4.5.T1 12372 7284
        AG1201_C25G4.4.T1 15163 13367
        AG1201_RIT4P.1807.T1 14433 14696
        AG1201_C25G4.6.T1 16274 17199
        AG1201_C25G4.7.T3 18820 19430
        AG1201_C25G4.7.T1 18820 19643
        AG1201_C25G4.8.T1 24494 20901
        AG1201_C25G4.8.T2 24494 20901
        AG1201_C25G4.10.T3 29752 31270
      Transcript (21)
      Pseudogene: C25G4.9:wp217 22363 23048
      Transposon: WBTransposon00000075 21810 23640
      Nongenomic: yk437b3 16222 17190
      PCR_product (45)
      Allele (646)
      Oligo_set: Aff_C25G4.1 3136 4117
        Aff_C25G4.2 5050 4350
        Aff_C25G4.3 6141 5620
        Aff_C25G4.4 14013 13367
        Aff_C25G4.5 7935 7284
        Aff_C25G4.6 16546 17199
        Aff_C25G4.7 18649 19643
        Aff_C25G4.8 21778 20901
      Feature_object (233)
      Feature_data: C25G4:Polysome 1 33706
        C25G4:TranscriptionallyActiveRegion 1 33706
        C25G4:ChIPSeqTF 1 33706
        C25G4:TRF 1 33706
        C25G4:Dust 1 33706
        C25G4:inverted 1 33706
      Homol_data (19)
  Structure: From: Source: CHROMOSOME_IV
    Overlap_right: T04A11 33603
    Overlap_left: F08G5
    Clone_left_end: C25G4 1
      T04A11 33603
    Clone_right_end: F08G5 7448
  DB_info: Database: EMBL NDB_AC Z70680
        NDB_SV Z70680.1
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Percy CM
    From_laboratory: HX
    Date_directory: 960224
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: C25G4
  Properties: Genomic_canonical
    Checksum: MD5: 735394a0c4cfd4e90676c5fa51775621
    Status: Finished: 24 Feb 1996 00:00:00
      Submitted: 06 Apr 1996 00:00:00
      Annotated: 02 Apr 1996 00:00:00
  Map: Sequence-IV Ends: Left: 6456
        Right: 6474
  Interpolated_map_position: IV 5.96658
  Assembly_tags: annotation 12826 12827
    Clone left end 1 4 C25G4
      33603 33606 T04A11
    Finished Left 1 1
    Clone right end 7445 7448 F08G5
    Finished Right 33706 33706
  Method: Genomic_canonical