WormBase Tree Display for Sequence: F43C9

F43C9 DNA: F43C9 34037
  SMap: S_child: Gene_child: WBGene00018375 20621 23500
        WBGene00018376 10955 17669
        WBGene00023047 16474 16546
        WBGene00198733 31761 31677
        WBGene00196467 16613 16396
        WBGene00201143 28486 28596
        WBGene00018377 9639 4854
        WBGene00201047 12256 12371
        WBGene00202168 17183 16968
        WBGene00003245 27470 23429
      CDS_child: F43C9.1 20854 23273
        F43C9.2a 13580 17492
        F43C9.2b 11144 17492
        F43C9.2c 11122 11163
        F43C9.3 9639 4854
        F43C9.3:wp102 9639 4854
        F43C9.3:wp227 9639 4854
        F43C9.4a 26985 23795
        F43C9.4b 26694 23795
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g146_x10_X_p 22549 22659
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g81_x10_X_m 26502 23798
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g57_x10_X_p 16310 17489
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g116_x10_X_p 20854 21261
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g65n11e5k63_x10_X_m 26694 25008
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g104_x10_X_p 22696 23270
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g56_x10_X_p 16310 17489
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g75_x10_X_m 26502 23837
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g74_x10_X_p 16310 17489
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g61n11_x10_X_m 26985 23798
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g80n11_x10_X_m 24161 24109
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g11_x10_X_p 13580 17489
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g124_x10_X_p 21217 21956
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g142_x10_X_p 22147 22617
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g55_x10_X_m 25359 23798
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g52_x10_X_m 26985 25964
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g109_x10_X_p 20947 21201
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g54_x10_X_p 23071 23270
        RNASEQ_embryo_him-8_20dC_post-L1_g25n11_x10_X_m 26985 23798
        RNASEQ_embryo_him-8_20dC_post-L1_g86_x10_X_p 16877 17402
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g166_x10_X_p 22696 22992
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g58_x10_X_m 26502 23798
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g137_x10_X_p 22023 22590
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g131_x10_X_p 21217 21959
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g21_x10_X_p 13580 17489
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g135_x10_X_p 20903 21151
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g142_x10_X_p 23071 23270
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g41n11_x10_X_m 26985 26563
        RNASEQ_L4_soma_JK1107_no_DNaseI_g124_x10_X_m 26502 25844
        RNASEQ_L4_soma_JK1107_no_DNaseI_g120_x10_X_m 25359 25143
        RNASEQ_L4_soma_JK1107_no_DNaseI_g56_x10_X_p 20854 23270
        RNASEQ_L4_soma_JK1107_no_DNaseI_g60_x10_X_p 13580 16970
        RNASEQ_L4_soma_JK1107_no_DNaseI_g110_x10_X_m 25124 23849
        RNASEQ_L4_soma_JK1107_no_DNaseI_g46n11_x10_X_p 16877 17489
        RNASEQ_L4_soma_JK1107_no_DNaseI_g82n11_x10_X_p 23071 23127
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g88n11_x10_X_p 23071 23127
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g115_x10_X_m 24161 23798
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g112_x10_X_p 20881 22182
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g114_x10_X_p 20689 20860
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g134_x10_X_p 22696 23270
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g120_x10_X_m 25124 25059
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g24_x10_X_p 13580 17489
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g118_x10_X_m 26484 25435
        RNASEQ_early_embryo_g33n11e6k170_x10_X_m 25213 24984
        RNASEQ_early_embryo_g33n11e3k79_x10_X_m 26344 26246
        RNASEQ_early_embryo_g129_x10_X_m 9304 9207
        RNASEQ_early_embryo_g44n11_x10_X_m 24161 24109
        RNASEQ_early_embryo_g105_x10_X_m 8917 8822
        RNASEQ_early_embryo_g72_x10_X_p 16310 17489
        RNASEQ_early_embryo_g33n11s3k71_x10_X_m 25359 25341
        RNASEQ_early_embryo_g33n11s5k84_x10_X_m 25124 25073
        RNASEQ_early_embryo_g33n11_x10_X_m 26985 23798
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g67_x10_X_p 13580 17489
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g41n11_x10_X_m 26985 23798
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g156_x10_X_m 9158 8979
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g128_x10_X_m 6274 6181
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g41n11e6k155_x10_X_m 25213 24984
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g41n11s3k232_x10_X_m 25359 25341
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g104_x10_X_m 8007 7948
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g41n11s5k99_x10_X_m 25124 25073
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g41n11s1k257_x10_X_m 26694 26392
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g71n11_x10_X_m 26985 23798
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g14_x10_X_p 13580 17489
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g14s1k80_x10_X_p 16310 16322
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g91_x10_X_p 20881 23270
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g124_x10_X_m 8722 8624
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g125_x10_X_m 5163 4941
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g129_x10_X_m 5292 5179
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g45_x10_X_p 13580 17489
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g90_x10_X_m 26502 23798
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g94_x10_X_p 20854 23031
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g127_x10_X_m 9432 9310
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g93_x10_X_p 23274 23471
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g111_x10_X_m 24161 23798
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g84_x10_X_m 26502 25074
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g26_x10_X_p 13580 17489
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g50_x10_X_p 20854 23270
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g119_x10_X_m 25124 24153
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g107_x10_X_p 23071 23225
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g157_x10_X_m 6105 5990
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g152_x10_X_m 26502 26282
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g85_x10_X_m 25834 25396
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g33_x10_X_p 13580 17489
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g83_x10_X_p 20881 22755
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g140_x10_X_p 20947 21261
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g160_x10_X_p 22023 22143
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g73_x10_X_p 13580 17489
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g42n11_x10_X_m 26985 23798
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g132_x10_X_p 23071 23198
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g98_x10_X_p 20690 20861
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g51n11_x10_X_p 16877 16970
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g49n11_x10_X_m 26985 23798
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g114_x10_X_p 16310 17489
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g164_x10_X_p 22549 22626
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g123_x10_X_p 22696 23270
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g49n11e3k66_x10_X_m 26344 26246
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g124_x10_X_m 24161 23798
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g49_x10_X_p 13580 16970
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g114n11_x10_X_p 22023 23270
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g52e3k50_x10_X_p 21133 21309
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g70n11_x10_X_m 26985 25405
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g149_x10_X_m 25359 24231
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g52_x10_X_p 20854 22051
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g29n11_x10_X_p 16877 17489
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g115n11_x10_X_p 23071 23127
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g142_x10_X_p 20947 21965
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g64n11_x10_X_m 26985 23798
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g79n11_x10_X_p 23071 23261
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g29_x10_X_p 13580 17489
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g104_x10_X_p 23071 23270
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g72_x10_X_m 26502 23798
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g26_x10_X_p 13580 17489
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g70_x10_X_p 20854 22764
        F43C9.gc1 9639 4854
        F43C9.gc2 13580 17492
        F43C9.gc3 20854 23273
        F43C9.gc4 26985 23795
        ContigX.elegans.jigsaw.747.mRNA747 13123 17827
        ContigX.elegans.jigsaw.748.mRNA748 20847 23535
        ContigX.elegans.jigsaw.746.mRNA746 9712 4766
        ContigX.elegans.jigsaw.749.mRNA749 26988 23450
        AG1201_F43C9.3.T1 9675 4854
        AG1201_F43C9.2.T8 11144 16972
        AG1201_F43C9.2.T9 11144 17492
        AG1201_F43C9.2.T6 12445 12678
        AG1201_F43C9.2.T3 13580 16969
        AG1201_F43C9.2.T4 13580 17492
        AG1201_F43C9.2.T5 13580 17492
        AG1201_F43C9.2.T2 16877 17492
        AG1201_F43C9.2.T1 17361 17492
        AG1201_F43C9.1.T1 20854 23273
        AG1201_F43C9.1.T4 20854 23273
        AG1201_F43C9.1.T3 22023 23273
        AG1201_F43C9.1.T2 23071 23273
        AG1201_F43C9.4.T4 24161 23795
        AG1201_F43C9.4.T2 25359 23795
        AG1201_F43C9.4.T3 26502 23795
        AG1201_F43C9.4.T1 26985 23795
        AG1201_F43C9.4.T10 26985 23795
        AG1201_F43C9.4.T6 26985 23795
        AG1201_F43C9.4.T5 26985 25315
      Transcript (14)
      Genomic_non_canonical: WRM0640bA11 208 31786
      PCR_product (15)
      Allele (536)
      Oligo_set: Aff_F43C9.1 22038 23273
        Aff_F43C9.2 16244 17873
        Aff_F43C9.3 6533 4854
        Aff_F43C9.4 26317 23795
      Feature_object (224)
      Feature_data: F43C9:Polysome 1 34037
        F43C9:TranscriptionallyActiveRegion 1 34037
        F43C9:ChIPSeqTF 1 34037
        F43C9:TRF 1 34037
        F43C9:Dust 1 34037
        F43C9:inverted 1 34037
      Homol_data (14)
  Structure: From: Source: CHROMOSOME_X
    Overlap_right: R08E3 33838
    Overlap_left: C39E6
    Clone_left_end: F43C9 1
    Clone_right_end: C39E6 9916
  DB_info: Database: EMBL NDB_AC FO080827
        NDB_ID _U40427
        NDB_SV FO080827.1
    Secondary_accession: U40427
    DB_remark: The 5' clone is C39E6, 200 bp overlap; the 3' clone is R08E3, 200 bp overlap. Actual start of this clone is at base position 1 of F43C9; actual end is at 5359 of R08E3.
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Fulton L
      Fulton LL
      Wilson RK
    From_laboratory: RW
    Date: 28 Jul 1995 00:00:00
    Species: Caenorhabditis elegans
  Visible: Clone: F43C9
    Reference: WBPaper00015325
      WBPaper00015421
      WBPaper00022782
  Properties (3)
  Map: Sequence-X
  Interpolated_map_position: X -6.35697
  Method: Genomic_canonical