WormBase Tree Display for Sequence: Y6B3A
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| Y6B3A | DNA | Y6B3A | 14474 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00305874 | 8829 | 8333 | |
| CDS_child | Y6B3A.1b | 12429 | 6642 | |||
| RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g54n11_x28_I_m | 12429 | 9748 | ||||
| RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g79_x28_I_m | 8391 | 4220 | ||||
| RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g110_x28_I_m | 8778 | 8557 | ||||
| RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g47n11_x28_I_m | 12429 | 4259 | ||||
| RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g101_x28_I_m | 6923 | 6145 | ||||
| RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g114_x28_I_m | 12309 | 11307 | ||||
| RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g138_x28_I_m | 9711 | 8809 | ||||
| RNASEQ_L4_soma_JK1107_no_DNaseI_g72_x28_I_m | 8391 | 5968 | ||||
| RNASEQ_L4_soma_JK1107_no_DNaseI_g63_x28_I_m | 4399 | 2710 | ||||
| RNASEQ_L4_soma_JK1107_no_DNaseI_g43n11_x28_I_m | 12429 | 8491 | ||||
| RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g53n11_x28_I_m | 12429 | 5950 | ||||
| RNASEQ_mid-L3_25dC_25hrs_post-L1_g10n11_x28_I_m | 12429 | 5839 | ||||
| RNASEQ_mid-L4_25dC_36hrs_post-L1_g15n11_x28_I_m | 12429 | 11028 | ||||
| RNASEQ_mid-L4_25dC_36hrs_post-L1_g28e4k62_x28_I_m | 7383 | 7166 | ||||
| Y6B3A.gc1 | 12429 | 56 | ||||
| Y6B3A.gc2 | 14474 | 12895 | ||||
| AG1201_Y6B3A.1.T1 | 12429 | 2581 | ||||
| AG1201_Y6B3A.1.T2 | 12429 | 2581 | ||||
| Transcript | Y6B3A.2 | 8829 | 8333 | |||
| Y6B3A.1b.1 | 12429 | 6642 | ||||
| PCR_product | sjj_Y6B3A.1 | 8272 | 9924 | |||
| Allele (196) | ||||||
| Oligo_set | Aff_W09C5.1 | 14403 | 12895 | |||
| Aff_Y6B3A.1 | 4161 | 2511 | ||||
| Feature_object (93) | ||||||
| Feature_data | Y6B3A:Polysome | 1 | 14474 | |||
| Y6B3A:TranscriptionallyActiveRegion | 1 | 14474 | ||||
| Y6B3A:ChIPSeqTF | 1 | 14474 | ||||
| Y6B3A:TRF | 1 | 14474 | ||||
| Y6B3A:Dust | 1 | 14474 | ||||
| Y6B3A:inverted | 1 | 14474 | ||||
| Homol_data (19) | ||||||
| Structure | From | Source | CHROMOSOME_I | |||
| Overlap_right | W09C5 | 14367 | ||||
| Overlap_left | Y87G2A | |||||
| Clone_left_end | Y6B3 | 1 | ||||
| W09C5 | 14367 | |||||
| Y6B3A | 1 | |||||
| Clone_right_end | Y6B3A | 14474 | ||||
| DB_info | Database | EMBL | NDB_AC | AL032650 | ||
| NDB_SV | AL032650.1 | |||||
| Secondary_accession | Z92865 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | White S | ||||
| From_laboratory | HX | |||||
| Date_directory | 980511 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | Y6B3A | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | ad19e69ad059537cdfe5920ecba6fd20 | ||||
| Status | Finished | 11 May 1998 00:00:00 | ||||
| Submitted | 29 Oct 1998 00:00:00 | |||||
| Annotated | 01 Jan 1980 00:00:00 | |||||
| Map | Sequence-I | Ends | Left | 6888 | ||
| Right | 6901 | |||||
| Interpolated_map_position | I | 21.5969 | ||||
| Assembly_tags | Clone left end | 1 | 6 | Y6B3 | ||
| 14370 | 14367 | W09C5... | ||||
| Finished Left | 1 | 6 | Y6B3A | |||
| annotation | 299 | 299 | [ ] Tandem repeat [ ] Single clone region [ ] Forced join [x] Other Comment Differs in YAC data | |||
| 320 | 320 | [ ] Tandem repeat [ ] Single clone region [ ] Forced join [x] Other Comment Differs in YAC data | ||||
| 1189 | 1189 | [ ] Tandem repeat [ ] Single clone region [ ] Forced join [x] Other Comment Differs in YAC data | ||||
| 1258 | 1258 | [ ] Tandem repeat [ ] Single clone region [ ] Forced join [x] Other Comment Differs in YAC data | ||||
| Finished Right | 14474 | 14471 | Y6B3A | |||
| Method | Genomic_canonical |
