WormBase Tree Display for Sequence: Cjap.Contig18203
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| Cjap.Contig18203 | DNA | Cjap.Contig18203 | 365308 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (74) | ||||
| CDS_child (176) | ||||||
| Transcript (81) | ||||||
| Pseudogene | CJA48071 | 213367 | 213439 | |||
| CJA48072 | 344119 | 344047 | ||||
| CJA48073 | 127429 | 127356 | ||||
| Feature_object (63) | ||||||
| Feature_data | Cjap.Contig18203:Confirmed_intron_RNASeq | 1 | 365308 | |||
| Cjap.Contig18203:Confirmed_intron_RNASeq:1 | 1 | 300000 | ||||
| Cjap.Contig18203:Confirmed_intron_RNASeq:2 | 300001 | 365308 | ||||
| Cjap.Contig18203:Dust | 1 | 365308 | ||||
| Cjap.Contig18203:inverted | 1 | 371397 | ||||
| Cjap.Contig18203:RNASeq:1 | 1 | 300000 | ||||
| Cjap.Contig18203:RNASeq:2 | 300001 | 365308 | ||||
| Cjap.Contig18203:RNASeq_forward_reads:1 | 1 | 300000 | ||||
| Cjap.Contig18203:RNASeq_forward_reads:2 | 300001 | 365308 | ||||
| Cjap.Contig18203:RNASeq_polyA:1 | ||||||
| Cjap.Contig18203:RNASeq_polyA:2 | ||||||
| Cjap.Contig18203:RNASeq_reverse_reads:1 | 1 | 300000 | ||||
| Cjap.Contig18203:RNASeq_reverse_reads:2 | 300001 | 365308 | ||||
| Cjap.Contig18203:RNASeq_SL1:1 | ||||||
| Cjap.Contig18203:RNASeq_SL1:2 | ||||||
| Cjap.Contig18203:RNASeq_SL2:1 | ||||||
| Cjap.Contig18203:RNASeq_SL2:2 | ||||||
| Cjap.Contig18203:TRF | 1 | 365308 | ||||
| Confirmed_intron_EST:Cjap.Contig18203_1 | 1 | 150000 | ||||
| Confirmed_intron_EST:Cjap.Contig18203_2 | 150001 | 300000 | ||||
| Confirmed_intron_EST:Cjap.Contig18203_3 | 300001 | 365308 | ||||
| Confirmed_intron_Trinity:Cjap.Contig18203_1 | 1 | 150000 | ||||
| Confirmed_intron_Trinity:Cjap.Contig18203_2 | 150001 | 300000 | ||||
| Confirmed_intron_Trinity:Cjap.Contig18203_3 | 300001 | 365308 | ||||
| Homol_data | Oligo_set:Cjap.Contig18203:AGILENT | 1 | 365308 | |||
| BLAT_EST:Cjap.Contig18203 | 1 | 365308 | ||||
| BLAT_EST:Cjap.Contig18203_1 | 1 | 150000 | ||||
| BLAT_EST:Cjap.Contig18203_2 | 150001 | 300000 | ||||
| BLAT_EST:Cjap.Contig18203_3 | 300001 | 365308 | ||||
| BLAT_mRNA:Cjap.Contig18203_1 | 1 | 150000 | ||||
| BLAT_mRNA:Cjap.Contig18203_3 | 300001 | 365308 | ||||
| BLAT_Trinity:Cjap.Contig18203 | 1 | 365308 | ||||
| BLAT_Trinity:Cjap.Contig18203_1 | 1 | 150000 | ||||
| BLAT_Trinity:Cjap.Contig18203_2 | 150001 | 300000 | ||||
| BLAT_Trinity:Cjap.Contig18203_3 | 300001 | 365308 | ||||
| BLAT_IsoSeq:Cjap.Contig18203 | 1 | 365308 | ||||
| BLAT_IsoSeq:Cjap.Contig18203_1 | 1 | 150000 | ||||
| BLAT_IsoSeq:Cjap.Contig18203_2 | 150001 | 300000 | ||||
| BLAT_IsoSeq:Cjap.Contig18203_3 | 300001 | 365308 | ||||
| BLAT_mRNA:Cjap.Contig18203 | 1 | 365308 | ||||
| BLAT_mRNA:Cjap.Contig18203_2 | 150001 | 300000 | ||||
| BLAT_OST:Cjap.Contig18203 | 1 | 365308 | ||||
| BLAT_OST:Cjap.Contig18203_1 | 1 | 150000 | ||||
| BLAT_OST:Cjap.Contig18203_2 | 150001 | 300000 | ||||
| BLAT_OST:Cjap.Contig18203_3 | 300001 | 365308 | ||||
| BLAT_tc1:Cjap.Contig18203_1 | 1 | 150000 | ||||
| BLAT_RST:Cjap.Contig18203_1 | 1 | 150000 | ||||
| BLAT_RST:Cjap.Contig18203_2 | 150001 | 300000 | ||||
| BLAT_RST:Cjap.Contig18203_3 | 300001 | 365308 | ||||
| BLAT_Nanopore:Cjap.Contig18203_1 | 1 | 150000 | ||||
| BLAT_Nanopore:Cjap.Contig18203_3 | 300001 | 365308 | ||||
| Cjap.Contig18203:wublastx_brenneri | 1 | 365308 | ||||
| Cjap.Contig18203:wublastx_briggsae | 1 | 365308 | ||||
| Cjap.Contig18203:wublastx_brugia | 1 | 365308 | ||||
| Cjap.Contig18203:wublastx_fly | 1 | 365308 | ||||
| Cjap.Contig18203:wublastx_human | 1 | 365308 | ||||
| Cjap.Contig18203:wublastx_japonica | 1 | 365308 | ||||
| Cjap.Contig18203:wublastx_ovolvulus | 1 | 365308 | ||||
| Cjap.Contig18203:wublastx_pristionchus | 1 | 365308 | ||||
| Cjap.Contig18203:wublastx_remanei | 1 | 365308 | ||||
| Cjap.Contig18203:wublastx_slimSwissProt | 1 | 365308 | ||||
| Cjap.Contig18203:wublastx_sratti | 1 | 365308 | ||||
| Cjap.Contig18203:wublastx_tmuris | 1 | 365308 | ||||
| Cjap.Contig18203:wublastx_worm | 1 | 365308 | ||||
| Cjap.Contig18203:wublastx_yeast | 1 | 365308 | ||||
| Cjap.Contig18203:RepeatMasker | 1 | 365308 | ||||
| DB_info | Database | NDB | NDB_ID | Scaffold18203 | ||
| NDB_AC | GL475351 | |||||
| NDB_SV | GL475351.1 | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis japonica | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 84740ede86eba5c57aabca55a62d82c0 | ||||
| Method | Genomic_canonical |
