WormBase Tree Display for Sequence: W09C3
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| W09C3 | DNA | W09C3 | 23793 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00021114 | 19659 | 18496 | |
| WBGene00021115 | 21722 | 21146 | ||||
| WBGene00021109 | 21723 | 23785 | ||||
| WBGene00219746 | 3786 | 7042 | ||||
| WBGene00021110 | 15590 | 17752 | ||||
| WBGene00021111 | 10752 | 13059 | ||||
| WBGene00021112 | 8780 | 10061 | ||||
| WBGene00021113 | 14888 | 13435 | ||||
| CDS_child (145) | ||||||
| Transcript | W09C3.9 | 3786 | 7042 | |||
| W09C3.1.1 | 21723 | 23785 | ||||
| W09C3.2.1 | 15590 | 17752 | ||||
| W09C3.3.1 | 10752 | 13059 | ||||
| W09C3.4.1 | 8780 | 10061 | ||||
| W09C3.6.1 | 14888 | 13435 | ||||
| W09C3.6.2 | 14616 | 13435 | ||||
| W09C3.7.1 | 19659 | 18496 | ||||
| W09C3.8.1 | 21722 | 21146 | ||||
| Nongenomic | yk363h7 | 18565 | 19613 | |||
| yk385e11 | 13506 | 14843 | ||||
| PCR_product (25) | ||||||
| Allele (244) | ||||||
| Oligo_set | Aff_W09C3.2 | 16842 | 17622 | |||
| Aff_W09C3.3 | 11995 | 12938 | ||||
| Aff_W09C3.4 | 9141 | 9889 | ||||
| Aff_W09C3.6 | 14279 | 13532 | ||||
| Aff_W09C3.7 | 19337 | 18558 | ||||
| Aff_W09C3.8 | 21235 | 20235 | ||||
| Feature_object | WBsf983468 | 3675 | 3825 | |||
| WBsf983469 | 4715 | 4865 | ||||
| WBsf983470 | 6015 | 6165 | ||||
| WBsf983471 | 8595 | 8745 | ||||
| WBsf983472 | 16935 | 17058 | ||||
| WBsf983473 | 22035 | 22119 | ||||
| WBsf1009696 | 3695 | 3845 | ||||
| WBsf027474 | 2752 | 2751 | ||||
| WBsf039032 | 12277 | 12937 | ||||
| WBsf039033 | 13532 | 14596 | ||||
| WBsf039034 | 21799 | 23750 | ||||
| WBsf048106 | 10020 | 10020 | ||||
| WBsf049219 | 9996 | 9996 | ||||
| WBsf050534 | 10053 | 10053 | ||||
| WBsf051274 | 9942 | 9942 | ||||
| WBsf052013 | 10055 | 10055 | ||||
| WBsf052868 | 9820 | 9820 | ||||
| WBsf052869 | 14561 | 14561 | ||||
| WBsf052870 | 17648 | 17648 | ||||
| WBsf053631 | 9214 | 9214 | ||||
| WBsf054812 | 9994 | 9994 | ||||
| WBsf122289 | 8785 | 8786 | ||||
| WBsf132930 | 19385 | 19384 | ||||
| WBsf136486 | 9998 | 9998 | ||||
| WBsf136487 | 14581 | 14581 | ||||
| WBsf136488 | 18536 | 18536 | ||||
| WBsf137561 | 9666 | 9666 | ||||
| WBsf138691 | 14561 | 14561 | ||||
| WBsf139024 | 18493 | 18493 | ||||
| WBsf139638 | 9977 | 9977 | ||||
| WBsf140953 | 9979 | 9979 | ||||
| WBsf140954 | 18583 | 18583 | ||||
| WBsf142056 | 8785 | 8786 | ||||
| WBsf217565 | 9890 | 9975 | ||||
| WBsf217566 | 9890 | 10042 | ||||
| WBsf217567 | 9890 | 10056 | ||||
| WBsf219312 | 13531 | 13458 | ||||
| WBsf219313 | 18557 | 18497 | ||||
| WBsf219314 | 21175 | 21147 | ||||
| WBsf219315 | 21175 | 21160 | ||||
| WBsf239015 | 10070 | 10071 | ||||
| WBsf239016 | 13430 | 13429 | ||||
| WBsf239017 | 18461 | 18460 | ||||
| WBsf241255 | 17746 | 17747 | ||||
| WBsf241256 | 13060 | 13061 | ||||
| WBsf269030 | 13442 | 13441 | ||||
| WBsf269235 | 13436 | 13435 | ||||
| WBsf269263 | 21143 | 21142 | ||||
| WBsf269346 | 18495 | 18494 | ||||
| WBsf269783 | 17748 | 17749 | ||||
| WBsf270057 | 18499 | 18498 | ||||
| WBsf270222 | 18504 | 18503 | ||||
| WBsf270543 | 13443 | 13442 | ||||
| WBsf602584 | 10057 | 10058 | ||||
| WBsf603452 | 10045 | 10046 | ||||
| WBsf604041 | 13469 | 13468 | ||||
| WBsf606121 | 18496 | 18495 | ||||
| WBsf606210 | 21149 | 21148 | ||||
| WBsf606779 | 4187 | 4188 | ||||
| WBsf948517 | 2752 | 2751 | ||||
| WBsf948518 | 4147 | 4146 | ||||
| WBsf948519 | 6590 | 6591 | ||||
| WBsf948520 | 8409 | 8410 | ||||
| WBsf948521 | 9518 | 9517 | ||||
| WBsf948522 | 10077 | 10078 | ||||
| WBsf216813 | 5285 | 5882 | ||||
| WBsf977593 | 3144 | 4090 | ||||
| WBsf977594 | 5032 | 6986 | ||||
| WBsf036670 | 827 | 1425 | ||||
| WBsf036681 | 1627 | 2125 | ||||
| WBsf036692 | 5327 | 5925 | ||||
| WBsf036704 | 9177 | 9275 | ||||
| WBsf280378 | 7296 | 7741 | ||||
| WBsf280563 | 3183 | 3896 | ||||
| WBsf280657 | 5133 | 5969 | ||||
| WBsf281385 | 4594 | 4652 | ||||
| WBsf281701 | 7314 | 7575 | ||||
| WBsf282610 | 5278 | 5961 | ||||
| WBsf282883 | 3372 | 3839 | ||||
| WBsf283548 | 3309 | 4096 | ||||
| WBsf285257 | 3193 | 4883 | ||||
| WBsf285301 | 5140 | 6187 | ||||
| WBsf285345 | 8483 | 8802 | ||||
| WBsf286596 | 5231 | 6222 | ||||
| WBsf286803 | 3306 | 4012 | ||||
| WBsf287608 | 6456 | 6811 | ||||
| WBsf287733 | 4534 | 5883 | ||||
| WBsf287842 | 3232 | 3963 | ||||
| WBsf288188 | 5247 | 5888 | ||||
| WBsf288209 | 3409 | 4037 | ||||
| WBsf288754 | 5209 | 6014 | ||||
| WBsf288782 | 3399 | 4008 | ||||
| WBsf289192 | 3491 | 3875 | ||||
| WBsf289433 | 7295 | 7486 | ||||
| WBsf289503 | 5387 | 5669 | ||||
| WBsf289665 | 5358 | 5709 | ||||
| WBsf289724 | 3399 | 3762 | ||||
| WBsf289922 | 7213 | 7432 | ||||
| WBsf290416 | 3426 | 3625 | ||||
| WBsf290497 | 2815 | 4050 | ||||
| WBsf290498 | 5153 | 6237 | ||||
| WBsf291606 | 8494 | 8800 | ||||
| WBsf291691 | 4335 | 4635 | ||||
| WBsf292930 | 1783 | 2032 | ||||
| WBsf293277 | 7427 | 7644 | ||||
| WBsf293638 | 5209 | 6225 | ||||
| WBsf293681 | 3377 | 4043 | ||||
| WBsf294178 | 832 | 1335 | ||||
| WBsf294892 | 3228 | 3983 | ||||
| WBsf294898 | 5242 | 5887 | ||||
| WBsf295062 | 5221 | 6220 | ||||
| WBsf295411 | 3250 | 6070 | ||||
| WBsf296191 | 3272 | 4071 | ||||
| WBsf296218 | 5199 | 6171 | ||||
| WBsf296823 | 3272 | 4071 | ||||
| WBsf296850 | 5199 | 6171 | ||||
| WBsf297414 | 7342 | 7670 | ||||
| WBsf297889 | 8562 | 8668 | ||||
| WBsf298382 | 3335 | 3876 | ||||
| WBsf298558 | 5212 | 6204 | ||||
| WBsf298576 | 3353 | 3929 | ||||
| WBsf299041 | 6611 | 6919 | ||||
| WBsf299672 | 7348 | 7587 | ||||
| WBsf299686 | 5185 | 6138 | ||||
| WBsf299697 | 3213 | 4015 | ||||
| WBsf300924 | 6654 | 6829 | ||||
| WBsf301081 | 3324 | 3952 | ||||
| WBsf301097 | 5244 | 5975 | ||||
| WBsf301531 | 5190 | 6226 | ||||
| WBsf301731 | 3322 | 3972 | ||||
| WBsf302231 | 5235 | 6100 | ||||
| WBsf302573 | 3001 | 6316 | ||||
| WBsf302821 | 6552 | 7591 | ||||
| WBsf303335 | 2156 | 2637 | ||||
| WBsf303452 | 10076 | 10243 | ||||
| WBsf303560 | 724 | 1226 | ||||
| WBsf304610 | 8558 | 8569 | ||||
| WBsf304898 | 8866 | 8897 | ||||
| WBsf305190 | 5208 | 6201 | ||||
| WBsf305287 | 5256 | 6226 | ||||
| WBsf305326 | 3376 | 4002 | ||||
| WBsf305596 | 5207 | 6120 | ||||
| WBsf305661 | 3317 | 3933 | ||||
| WBsf306141 | 3287 | 4060 | ||||
| WBsf306226 | 5284 | 6271 | ||||
| WBsf306462 | 7307 | 7732 | ||||
| WBsf306804 | 4726 | 4943 | ||||
| WBsf306871 | 3331 | 4143 | ||||
| WBsf307278 | 2034 | 6369 | ||||
| WBsf307872 | 1581 | 1600 | ||||
| WBsf308601 | 6611 | 7723 | ||||
| WBsf309278 | 5240 | 6158 | ||||
| WBsf309322 | 3342 | 4121 | ||||
| WBsf310136 | 3270 | 3915 | ||||
| WBsf310138 | 5183 | 5967 | ||||
| WBsf310181 | 5236 | 6164 | ||||
| WBsf310188 | 3379 | 4168 | ||||
| WBsf310455 | 7336 | 7846 | ||||
| WBsf311140 | 3189 | 3957 | ||||
| WBsf311291 | 763 | 1385 | ||||
| WBsf311520 | 4724 | 5884 | ||||
| WBsf311753 | 1780 | 2106 | ||||
| WBsf312806 | 5246 | 6289 | ||||
| WBsf313237 | 6606 | 7587 | ||||
| WBsf313287 | 3278 | 3987 | ||||
| WBsf313613 | 3116 | 4198 | ||||
| WBsf313881 | 5162 | 6346 | ||||
| WBsf314201 | 3252 | 4070 | ||||
| WBsf314240 | 5213 | 6251 | ||||
| WBsf314417 | 6578 | 7714 | ||||
| WBsf314993 | 1718 | 2063 | ||||
| WBsf315053 | 4410 | 4914 | ||||
| WBsf315179 | 875 | 1324 | ||||
| WBsf317196 | 3193 | 4022 | ||||
| WBsf317339 | 5272 | 6264 | ||||
| WBsf318767 | 8714 | 8765 | ||||
| WBsf319248 | 444 | 450 | ||||
| WBsf319316 | 10152 | 10187 | ||||
| WBsf319770 | 3196 | 3980 | ||||
| WBsf319850 | 4706 | 6261 | ||||
| WBsf320332 | 785 | 1270 | ||||
| WBsf320364 | 6674 | 6886 | ||||
| WBsf320776 | 2339 | 2351 | ||||
| WBsf321363 | 5328 | 5937 | ||||
| WBsf321494 | 3338 | 3733 | ||||
| WBsf321640 | 5270 | 5659 | ||||
| WBsf323370 | 3205 | 4066 | ||||
| WBsf323414 | 5224 | 5999 | ||||
| WBsf323838 | 6607 | 6976 | ||||
| WBsf323922 | 4400 | 4768 | ||||
| WBsf323986 | 7236 | 7765 | ||||
| WBsf324671 | 5223 | 5989 | ||||
| WBsf324713 | 3353 | 3968 | ||||
| WBsf325032 | 8517 | 8798 | ||||
| WBsf326001 | 5212 | 5956 | ||||
| WBsf326006 | 3279 | 3975 | ||||
| WBsf326015 | 8622 | 8652 | ||||
| WBsf326231 | 5211 | 6317 | ||||
| WBsf326731 | 5207 | 6267 | ||||
| WBsf326807 | 3423 | 3944 | ||||
| WBsf327558 | 4474 | 6260 | ||||
| WBsf328045 | 3293 | 3987 | ||||
| WBsf328284 | 5213 | 6292 | ||||
| WBsf328294 | 3332 | 4074 | ||||
| WBsf329087 | 5188 | 6180 | ||||
| WBsf329167 | 3287 | 4134 | ||||
| WBsf329986 | 734 | 1400 | ||||
| WBsf330058 | 4691 | 5978 | ||||
| WBsf330090 | 3376 | 4044 | ||||
| WBsf330326 | 1658 | 2089 | ||||
| WBsf331089 | 7342 | 7651 | ||||
| WBsf332549 | 5094 | 6239 | ||||
| WBsf332837 | 3282 | 3937 | ||||
| WBsf333737 | 5460 | 5718 | ||||
| WBsf334296 | 5316 | 5828 | ||||
| WBsf334891 | 3560 | 3831 | ||||
| WBsf334950 | 5356 | 5759 | ||||
| WBsf334977 | 3501 | 3885 | ||||
| WBsf335147 | 7505 | 7702 | ||||
| WBsf335342 | 5196 | 6211 | ||||
| WBsf335394 | 3297 | 4111 | ||||
| WBsf335704 | 8534 | 8685 | ||||
| WBsf335858 | 761 | 792 | ||||
| WBsf336128 | 5337 | 5673 | ||||
| WBsf336178 | 3439 | 3893 | ||||
| WBsf336394 | 3424 | 3951 | ||||
| WBsf336413 | 5304 | 5990 | ||||
| WBsf337329 | 5124 | 6104 | ||||
| WBsf337371 | 3212 | 3990 | ||||
| WBsf339216 | 3372 | 3843 | ||||
| WBsf339538 | 3324 | 3988 | ||||
| WBsf339603 | 5276 | 5818 | ||||
| WBsf339835 | 7263 | 7640 | ||||
| WBsf340225 | 3505 | 3927 | ||||
| WBsf340403 | 7423 | 7631 | ||||
| WBsf340464 | 5455 | 5694 | ||||
| WBsf045097 | 8626 | 8969 | ||||
| WBsf643230 | 8672 | 8687 | ||||
| WBsf655267 | 7446 | 7309 | ||||
| WBsf655268 | 7639 | 7607 | ||||
| WBsf656243 | 9806 | 9806 | ||||
| WBsf664174 | 170 | 151 | ||||
| WBsf664175 | 935 | 935 | ||||
| WBsf664176 | 1947 | 1910 | ||||
| WBsf672470 | 3714 | 3884 | ||||
| WBsf672471 | 3917 | 3962 | ||||
| WBsf672472 | 4495 | 4495 | ||||
| WBsf672473 | 4807 | 4871 | ||||
| WBsf672474 | 5587 | 5638 | ||||
| WBsf672475 | 5683 | 5799 | ||||
| WBsf672476 | 5857 | 5939 | ||||
| WBsf672477 | 6122 | 6138 | ||||
| WBsf672478 | 7540 | 7737 | ||||
| WBsf672479 | 10874 | 10922 | ||||
| WBsf694101 | 3591 | 3408 | ||||
| WBsf694102 | 4593 | 4542 | ||||
| WBsf694103 | 4722 | 4709 | ||||
| WBsf694104 | 4814 | 4814 | ||||
| WBsf694105 | 4905 | 4904 | ||||
| WBsf694106 | 5088 | 5087 | ||||
| WBsf694107 | 5523 | 5235 | ||||
| WBsf694108 | 5743 | 5713 | ||||
| WBsf694109 | 5807 | 5794 | ||||
| WBsf694110 | 6672 | 6633 | ||||
| WBsf694111 | 8864 | 8864 | ||||
| WBsf694112 | 8984 | 8964 | ||||
| WBsf694113 | 10518 | 10518 | ||||
| WBsf694114 | 10780 | 10720 | ||||
| Feature_data | W09C3:Polysome | 1 | 23793 | |||
| W09C3:TranscriptionallyActiveRegion | 1 | 23793 | ||||
| W09C3:ChIPSeqTF | 1 | 23793 | ||||
| W09C3:TRF | 1 | 23793 | ||||
| W09C3:Dust | 1 | 23793 | ||||
| W09C3:inverted | 1 | 23793 | ||||
| Homol_data (18) | ||||||
| Structure | From | Source | CHROMOSOME_I | |||
| Overlap_right | C10H11 | 22594 | ||||
| Overlap_left | T04D1 | |||||
| Clone_left_end | C10H11 | 22594 | ||||
| W09C3 | 1 | |||||
| Clone_right_end | T04D1 | 17606 | ||||
| W09C3 | 23363 | |||||
| DB_info | Database | EMBL | NDB_AC | FO080504 | ||
| NDB_ID | _U88178 | |||||
| NDB_SV | FO080504.1 | |||||
| Secondary_accession | U88178 | |||||
| DB_remark | The 5' clone is T04D1, 2100 bp overlap; the 3' clone is C10H11, 1200 bp overlap. Actual start of this clone is at base position 1 of W09C3; actual end is at 23363 of W09C3. | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Wamsley P | ||||
| Kramer J | ||||||
| From_laboratory | RW | |||||
| Date | 09 Aug 1996 00:00:00 | |||||
| Date_directory | 960807 | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | W09C3 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | fc482b246fddf3645d9a02d8dab79a0c | ||||
| Status | Shotgun | |||||
| Finished | ||||||
| Submitted | 09 Aug 1996 00:00:00 | |||||
| Map | Sequence-I | |||||
| Interpolated_map_position | I | -0.851524 | ||||
| Method | Genomic_canonical |
