WormBase Tree Display for Sequence: Y54G2A
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| Y54G2A | DNA | Y54G2A | 286680 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (79) | ||||
| CDS_child (1495) | ||||||
| Transcript (115) | ||||||
| Pseudogene | Y54G2A.20 | 150417 | 146747 | |||
| Y54G2A.21 | 164595 | 152215 | ||||
| Y54G2A.24 | 189641 | 187769 | ||||
| Y54G2A.42 | 28890 | 30445 | ||||
| Transposon | WBTransposon00000722 | 159712 | 152551 | |||
| Genomic_non_canonical (12) | ||||||
| Nongenomic | yk151d6 | 273223 | 278345 | |||
| yk178a7 | 236329 | 241895 | ||||
| yk229c12 | 138376 | 141278 | ||||
| yk253f1 | 49513 | 50697 | ||||
| PCR_product (106) | ||||||
| Allele (5253) | ||||||
| Oligo_set (52) | ||||||
| Feature_object (1976) | ||||||
| Feature_data | Y54G2A:Polysome | 1 | 286680 | |||
| Y54G2A:TranscriptionallyActiveRegion | 1 | 286680 | ||||
| Y54G2A:ChIPSeqTF | 1 | 286680 | ||||
| Y54G2A:TRF | 1 | 286680 | ||||
| Y54G2A:Dust | 1 | 286680 | ||||
| Y54G2A:inverted | 1 | 286680 | ||||
| Homol_data | Y54G2A:RNAi | 1 | 286680 | |||
| Y54G2A:SAGE | 1 | 286680 | ||||
| Y54G2A:Mass-spec | 1 | 286680 | ||||
| Y54G2A:BLAT_ncRNA | 1 | 286680 | ||||
| Y54G2A:Expr | 1 | 286680 | ||||
| Y54G2A:TEC_RED | 1 | 286680 | ||||
| Y54G2A:G4_DNA | 1 | 286680 | ||||
| Y54G2A:wublastx_brenneri | 1 | 286680 | ||||
| Y54G2A:wublastx_briggsae | 1 | 286680 | ||||
| Y54G2A:wublastx_brugia | 1 | 286680 | ||||
| Y54G2A:wublastx_fly | 1 | 286680 | ||||
| Y54G2A:wublastx_human | 1 | 286680 | ||||
| Y54G2A:wublastx_japonica | 1 | 286680 | ||||
| Y54G2A:wublastx_ovolvulus | 1 | 286680 | ||||
| Y54G2A:wublastx_pristionchus | 1 | 286680 | ||||
| Y54G2A:wublastx_remanei | 1 | 286680 | ||||
| Y54G2A:wublastx_slimSwissProt | 1 | 286680 | ||||
| Y54G2A:wublastx_sratti | 1 | 286680 | ||||
| Y54G2A:wublastx_tmuris | 1 | 286680 | ||||
| Y54G2A:wublastx_worm | 1 | 286680 | ||||
| Y54G2A:wublastx_yeast | 1 | 286680 | ||||
| Y54G2A:RepeatMasker | 1 | 286680 | ||||
| Structure | From | Source | CHROMOSOME_IV | |||
| Overlap_right | Y67D8C | 282481 | ||||
| Overlap_left | Y94H6A | |||||
| Clone_left_end | Y54G2 | 1 | ||||
| Y67D8 | 199737 | |||||
| Y54G2A | 1 | |||||
| Clone_right_end | Y54G2 | 286680 | ||||
| Y54G2A | 286680 | |||||
| DB_info | Database | EMBL | NDB_AC | FO081809 | ||
| NDB_ID | _AC024817 | |||||
| NDB_SV | FO081809.2 | |||||
| Secondary_accession | AC024817 | |||||
| DB_remark | The 5' clone is Y94H6A, 200 bp overlap; the 3' clone is Y67D8C, 4200 bp overlap. | |||||
| [121025] Sequence correction: SNP 0 bases @ 248905 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author (2) | |||||
| From_laboratory | RW | |||||
| Date | 17 Dec 1999 00:00:00 | |||||
| Date_directory | ||||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | Y54G2A | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 2a5fecbc050dd8e7e490ac288114c6bc | ||||
| Status | Finished | |||||
| Submitted | 17 Dec 1999 00:00:00 | |||||
| Map | Sequence-IV | |||||
| Interpolated_map_position | IV | -6.72319 | ||||
| Method | Genomic_canonical |
