WormBase Tree Display for Sequence: W09C5
expand all nodes | collapse all nodes | view schema
| W09C5 | DNA | W09C5 | 34874 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (14) | ||||
| CDS_child (263) | ||||||
| Transcript (17) | ||||||
| Pseudogene | W09C5.3 | 6907 | 7823 | |||
| W09C5.9 | 31296 | 33630 | ||||
| Nongenomic | yk488d5 | 12244 | 20235 | |||
| PCR_product | WBPaper00038381:W09C5_1_1 | 24885 | 25550 | |||
| cenix:118-a6 | 24269 | 25551 | ||||
| cenix:122-b4 | 30475 | 31035 | ||||
| cenix:126-g2 | 16325 | 16777 | ||||
| cenix:134-h8 | 10783 | 11376 | ||||
| cenix:141-c11 | 3098 | 4226 | ||||
| cenix:19-d3 | 26673 | 27572 | ||||
| cenix:235-c8 | 33516 | 33630 | ||||
| cenix:76-d6 | 24269 | 25551 | ||||
| mv_W09C5.2 | 1099 | 5132 | ||||
| mv_W09C5.4 | 9850 | 11167 | ||||
| mv_W09C5.5 | 12301 | 20261 | ||||
| mv_W09C5.6a | 24860 | 25549 | ||||
| mv_W09C5.6b | 24859 | 25068 | ||||
| mv_W09C5.7 | 26101 | 30002 | ||||
| mv_W09C5.8 | 30349 | 30975 | ||||
| mv_W09C5.9 | 32468 | 33628 | ||||
| p_W09C5.2_93 | 272 | 1097 | ||||
| p_W09C5.7_93 | 25549 | 26099 | ||||
| p_W09C5.8_93 | 30977 | 32468 | ||||
| sjj2_W09C5.5 | 15124 | 16809 | ||||
| sjj2_W09C5.6a | 24731 | 25912 | ||||
| sjj_W09C5.2 | 3515 | 5213 | ||||
| sjj_W09C5.4 | 9843 | 11364 | ||||
| sjj_W09C5.5 | 14975 | 16794 | ||||
| sjj_W09C5.6 | 24723 | 25816 | ||||
| sjj_W09C5.7 | 25914 | 27044 | ||||
| sjj_W09C5.8 | 30226 | 31345 | ||||
| sjj_W09C5.9 | 32430 | 34064 | ||||
| smd_0W09C5.2 | 3515 | 5213 | ||||
| smd_0W09C5.4 | 9843 | 11364 | ||||
| Allele (505) | ||||||
| Oligo_set | Aff_W09C5.2 | 3754 | 5135 | |||
| Aff_W09C5.4 | 11168 | 9848 | ||||
| Aff_W09C5.5 | 13997 | 12299 | ||||
| Aff_W09C5.6A | 25549 | 24856 | ||||
| Aff_W09C5.6B | 25068 | 24856 | ||||
| Aff_W09C5.7 | 29358 | 30003 | ||||
| Aff_W09C5.8 | 30975 | 30346 | ||||
| Feature_object (490) | ||||||
| Feature_data | W09C5:Polysome | 1 | 34874 | |||
| W09C5:TranscriptionallyActiveRegion | 1 | 34874 | ||||
| W09C5:ChIPSeqTF | 1 | 34874 | ||||
| W09C5:TRF | 1 | 34874 | ||||
| W09C5:Dust | 1 | 34874 | ||||
| W09C5:inverted | 1 | 34874 | ||||
| Homol_data (21) | ||||||
| Structure | From | Source | CHROMOSOME_I | |||
| Overlap_right | W04A4 | 34871 | ||||
| Overlap_left | Y6B3A | |||||
| Clone_left_end | W09C5 | 1 | ||||
| W04A4 | 34871 | |||||
| Clone_right_end | W09C5 | 34874 | ||||
| DB_info | Database | EMBL | NDB_AC | Z82077 | ||
| NDB_SV | Z82077.2 | |||||
| DB_remark | [121025] Sequence correction WBsf267950 : Insertion A1 bases from @ 16125 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Lennard N | ||||
| From_laboratory | HX | |||||
| Date_directory | 980914 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | W09C5 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | cef0bc2ff8a24e016ca864490e0d0ea0 | ||||
| Status | Shotgun | |||||
| Finished | 14 Sep 1998 00:00:00 | |||||
| Submitted | 06 Nov 1996 00:00:00 | |||||
| Annotated | 01 Jan 1980 00:00:00 | |||||
| Map | Sequence-I | Ends | Left | 6898 | ||
| Right | 6911 | |||||
| Interpolated_map_position | I | 21.6292 | ||||
| Assembly_tags | Clone left end | 1 | 4 | W09C5 | ||
| 34869 | 34874 | W04A4 | ||||
| Finished Left | 1 | 4 | W09C5 | |||
| annotation | 14562 | 14562 | First select a Feature - [ ] Unsure [X] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [ ] Single clone region [ ] Forced join [X] Other Add a comment here - W09C5 calls a G here, overlying clone Y6B3 calls a T. | |||
| Clone right end | 34874 | 34869 | W09C5 | |||
| Finished Right | 34874 | 34869 | W09C5 | |||
| Method | Genomic_canonical |
