WormBase Tree Display for Sequence: C05H8
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C05H8 | DNA | C05H8 | 10913 | |||
---|---|---|---|---|---|---|
SMap | S_child | CDS_child (60) | ||||
Transcript | C05H8.3 | 10198 | 10096 | |||
C05H8.4 | 10360 | 10225 | ||||
C05H8.1a.1 | 7773 | 10794 | ||||
PCR_product | TH:301F9 | 7842 | 9803 | |||
TH:314D10 | 1280 | 2595 | ||||
cenix:301-f9 | 7838 | 9807 | ||||
cenix:314-d10 | 1279 | 2596 | ||||
mv_BAA77824 | 7974 | 9838 | ||||
mv_C05H8.2 | 1333 | 2510 | ||||
p_C05H8.1_93 | 5973 | 7972 | ||||
sjj_C05H8.1 | 8364 | 9807 | ||||
sjj_C05H8.2 | 1316 | 2873 | ||||
smd_C05H8.1:2 | 8332 | 9766 | ||||
Allele (137) | ||||||
Oligo_set | Aff_C05H8.1 | 9101 | 9838 | |||
Aff_C05H8.2 | 1331 | 2511 | ||||
Feature_object (52) | ||||||
Feature_data | C05H8:TranscriptionallyActiveRegion | 1 | 10913 | |||
C05H8:ChIPSeqTF | 1 | 10913 | ||||
C05H8:TRF | 1 | 10913 | ||||
C05H8:Dust | 1 | 10913 | ||||
C05H8:inverted | 1 | 10913 | ||||
Homol_data (19) | ||||||
Structure | From | Source | CHROMOSOME_III | |||
Overlap_right | F54E7 | 9914 | ||||
Overlap_left | C05D2 | |||||
Clone_left_end | F54E7 | 9914 | ||||
Clone_right_end | C05D2 | 200 | ||||
DB_info | Database | EMBL | NDB_AC | FO080357 | ||
NDB_ID | _U11029 | |||||
NDB_SV | FO080357.2 | |||||
Secondary_accession | U11029 | |||||
DB_remark | The 5' clone is C05D2, 200 bp overlap; the 3' clone is F54E7, 1000 bp overlap. Actual start of this clone is at base position 28140 of C05D2; actual end is at 15175 of F54E7. | |||||
[121025] Sequence correction WBsf268010 : Insertion C1 bases from @ 659 | ||||||
[121025] Sequence correction WBsf268601 : Insertion C1 bases from @ 4032 | ||||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Ding H | ||||
From_laboratory | RW | |||||
Date | 01 Jun 1994 00:00:00 | |||||
Species | Caenorhabditis elegans | |||||
Visible | Clone | C05H8 | ||||
Remark | [20030325 db] added 800 bp to the 3' end | |||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | df609f2b09e7b73bc4725014e80b8583 | ||||
Status | Finished | |||||
Submitted | 01 Jun 1994 00:00:00 | |||||
Map | Sequence-III | |||||
Interpolated_map_position | III | -1.46421 | ||||
Method | Genomic_canonical |