WormBase Tree Display for Sequence: C07E3
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| C07E3 | DNA | C07E3 | 43815 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (15) | ||||
| CDS_child (285) | ||||||
| Transcript (19) | ||||||
| Genomic_non_canonical | WRM067cH01 | 4207 | 26365 | |||
| WRM0617bG10 | 129 | 36077 | ||||
| WRM0640dD10 | 12172 | 42247 | ||||
| PCR_product (41) | ||||||
| Allele (672) | ||||||
| Oligo_set | Aff_C07E3.1 | 4929 | 4234 | |||
| Aff_C07E3.10 | 3493 | 3940 | ||||
| Aff_C07E3.3 | 11540 | 10849 | ||||
| Aff_C07E3.5 | 22100 | 20797 | ||||
| Aff_C07E3.6 | 26625 | 25352 | ||||
| Aff_C07E3.7 | 25239 | 25003 | ||||
| Aff_C07E3.8 | 9834 | 10582 | ||||
| Aff_C07E3.9 | 7853 | 8574 | ||||
| Aff_T09F3.1 | 43683 | 44855 | ||||
| Feature_object (372) | ||||||
| Feature_data | C07E3:Polysome | 1 | 43815 | |||
| C07E3:TranscriptionallyActiveRegion | 1 | 43815 | ||||
| C07E3:ChIPSeqTF | 1 | 43815 | ||||
| C07E3:TRF | 1 | 43815 | ||||
| C07E3:Dust | 1 | 43815 | ||||
| C07E3:inverted | 1 | 43815 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_II | |||
| Overlap_right | T09F3 | 43713 | ||||
| Overlap_left | VM02G9R | |||||
| Clone_left_end | C07E3 | 1 | ||||
| T09F3 | 43713 | |||||
| DB_info | Database | EMBL | NDB_AC | Z49908 | ||
| NDB_SV | Z49908.1 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Matthews P | ||||
| From_laboratory | HX | |||||
| Date_directory | 950226 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | C07E3 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 2f59cbf6cfe567e9e7fa73a4cb01ff65 | ||||
| Status | Finished | 26 Feb 1995 00:00:00 | ||||
| Submitted | 23 Jun 1995 00:00:00 | |||||
| Annotated | 21 Jun 1995 00:00:00 | |||||
| Map | Sequence-II | Ends | Left | 6115 | ||
| Right | 6149 | |||||
| Interpolated_map_position | II | 2.47163 | ||||
| Assembly_tags | Clone left end | 1 | 4 | Start of C07E3 | ||
| 43713 | 43716 | Begining of T09F3 | ||||
| annotation | 11813 | 11857 | 45 bases not double stranded with +ve read. Negative strand terminated to confirm sequence. | |||
| 32083 | 32149 | This region not completely d.s. because of run of Gs (probably 22bp) preventing - d.s. from 32083 to 32133 (50bp) and + d.s. from 32153 to 32233 (80bp) In both cases, sequence confirmed by terminators on opposite strand | ||||
| 32150 | 32232 | This region not completely d.s. because of run of Gs (probably 22bp) preventing - d.s. from 32083 to 32133 (50 bp) and + d.s. from 32153 to 32233 (80 bp). In both cases, sequence confirmed by terminators on opposite strand. | ||||
| 43813 | 43816 | End of edit?!?!!! | ||||
| Method | Genomic_canonical |
