WormBase Tree Display for Sequence: C09F5
expand all nodes | collapse all nodes | view schema
C09F5 | DNA | C09F5 | 16151 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child | WBGene00015649 | 14381 | 11842 | |
WBGene00015647 | 7824 | 11847 | ||||
CDS_child (112) | ||||||
Transcript | C09F5.1a.1 | 7824 | 11847 | |||
C09F5.1b.1 | 9257 | 11821 | ||||
C09F5.2b.1 | 2012 | 3523 | ||||
C09F5.3.1 | 14381 | 11842 | ||||
Nongenomic | yk284c8 | 2010 | 3460 | |||
PCR_product (14) | ||||||
Allele (397) | ||||||
Oligo_set | Aff_C09F5.1 | 10262 | 11627 | |||
Aff_C09F5.2 | 2368 | 3402 | ||||
Aff_C09F5.3 | 13192 | 12003 | ||||
Feature_object (109) | ||||||
Feature_data | C09F5:Polysome | 1 | 16151 | |||
C09F5:TranscriptionallyActiveRegion | 1 | 16151 | ||||
C09F5:ChIPSeqTF | 1 | 16151 | ||||
C09F5:TRF | 1 | 16151 | ||||
C09F5:Dust | 1 | 16151 | ||||
C09F5:inverted | 1 | 16151 | ||||
Homol_data (16) | ||||||
Structure | From | Source | CHROMOSOME_III | |||
Overlap_right | W02B3 | 15952 | ||||
Overlap_left | W06E11 | |||||
Clone_left_end | C09F5 | 197 | ||||
W02B3 | 15952 | |||||
Clone_right_end | W06E11 | 15959 | ||||
DB_info | Database | EMBL | NDB_AC | FO080475 | ||
NDB_ID | _U22832 | |||||
NDB_SV | FO080475.2 | |||||
Secondary_accession | U22832 | |||||
DB_remark | The 5' clone is W06E11, 200 bp overlap; the 3' clone is W02B3, 200 bp overlap. Actual start of this clone is at base position 197 of C09F5; actual end is at 25599 of W02B3. | |||||
[121025] Sequence correction WBsf268333 : Insertion G1 bases from @ 14513 | ||||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Connell M | ||||
From_laboratory | RW | |||||
Date | 29 Sep 1994 00:00:00 | |||||
Species | Caenorhabditis elegans | |||||
Visible | Clone | C09F5 | ||||
Remark | [20100423 wnash] added 1 bp (g) at position 10135 (between AGTGCCGGAG and AAAAACCCGG) | |||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | be40d45cbbd94249aa9cf31fe62016e3 | ||||
Status | Finished | |||||
Submitted | 29 Sep 1994 00:00:00 | |||||
Map | Sequence-III | |||||
Interpolated_map_position | III | -26.3169 | ||||
Method | Genomic_canonical |