WormBase Tree Display for Sequence: Cjap.Contig16299

Cjap.Contig16299 DNA: Cjap.Contig16299 155081
  SMap: S_child: Gene_child: WBGene00121248 13651 10680
        WBGene00121471 16107 19571
        WBGene00121886 1145 143
        WBGene00121945 31270 27334
        WBGene00122877 78704 73842
        WBGene00124748 5738 4494
        WBGene00126680 47233 51233
        WBGene00127872 26246 26950
        WBGene00128364 40750 33527
        WBGene00129533 25002 19572
        WBGene00131668 107782 131695
        WBGene00133186 40931 46900
        WBGene00135645 53354 56590
        WBGene00137200 136647 139029
        WBGene00137503 145618 144998
        WBGene00176326 70539 65268
        WBGene00176406 153147 152155
        WBGene00208392 10271 5848
        WBGene00212475 33166 33423
        WBGene00214889 51580 51217
        WBGene00219144 2123 3388
      CDS_child: CJA02044 13637 10680
        CJA02266 16107 19373
        CJA02682a 1145 798
        CJA02682b 1145 143
        CJA02741a 31270 27858
        CJA02741b 31270 27334
        CJA03673 78704 73842
        CJA05544 5738 4494
        CJA07476a 47260 51177
        CJA07476b 47302 51177
        CJA08670 26248 26873
        CJA09159 40746 33661
        CJA10329 25002 19791
        CJA12464 107782 131695
        CJA13982 40931 46900
        CJA16442a 53354 56590
        CJA16442b 53354 56590
        CJA17996 136647 139029
        CJA18298 145618 144998
        CJA20754 70539 65268
        CJA20834 153147 152155
        CJA32545 10271 6056
        CJA36628 33166 33423
        CJA39042 51541 51263
        CJA43296 2123 3388
        GBG_japonica_F55C7.7f 119827 141889
        GBG_japonica_C43E11.8 40892 46900
        GBG_japonica_F28H1.1 145618 144998
        GBG_japonica_C50A2.2a 25341 24131
        GBG_japonica_ZK973.5 5738 143
        GBG_japonica_F55C7.7d 112983 131695
        GBG_japonica_F55C7.7g 120014 131695
        GBG_japonica_C43E11.7 47130 51177
        GBG_japonica_F55C7.7h 119357 141889
        GBG_japonica_ZK973.10 26248 26873
        GBG_japonica_F55C7.7c 120014 141889
        GBG_japonica_ZK973.2 31270 27573
        GBG_japonica_F55C7.7a 78926 110772
        GBG_japonica_F55C7.7i 78926 110772
        GBG_japonica_ZK973.9 20525 19791
        GBG_japonica_Y54G11A.19 69466 69735
        GBG_japonica_F55C7.7e 119357 131695
        GBG_japonica_ZK973.11 40826 33661
        GBG_japonica_F55C7.7b 78926 100108
        GBG_japonica_ZK973.3 16613 19373
      Transcript: CJA02044.1 13651 10680
        CJA02266.1 16107 19571
        CJA02682a.1 1145 798
        CJA02682b.1 1145 143
        CJA02741a.1 31270 27858
        CJA02741b.1 31270 27334
        CJA03673.1 78704 73842
        CJA05544.1 5738 4494
        CJA07476a.1 47233 51233
        CJA07476b.1 47302 51177
        CJA08670.1 26246 26950
        CJA09159.1 40750 33527
        CJA10329.1 25002 19572
        CJA12464.1 107782 131695
        CJA13982.1 40931 46900
        CJA16442a.1 53354 56590
        CJA16442b.1 53354 56590
        CJA17996.1 136647 139029
        CJA18298.1 145618 144998
        CJA20754.1 70539 65268
        CJA20834.1 153147 152155
        CJA32545.1 10271 5848
        CJA36628.1 33166 33423
        CJA39042.1 51580 51217
        CJA43296.1 2123 3388
      Feature_object: WBsf#Cjap.Contig16299#7085#-#SL2 7085 7084
        WBsf#Cjap.Contig16299#10289#-#SL1 10289 10288
        WBsf#Cjap.Contig16299#10289#-#SL2 10289 10288
        WBsf#Cjap.Contig16299#11236#-#SL2 11236 11235
        WBsf#Cjap.Contig16299#13656#-#SL1 13656 13655
        WBsf#Cjap.Contig16299#19271#+#SL1 19271 19272
        WBsf#Cjap.Contig16299#25016#-#SL1 25016 25015
        WBsf#Cjap.Contig16299#25016#-#SL2 25016 25015
        WBsf#Cjap.Contig16299#26247#+#SL1 26247 26248
        WBsf#Cjap.Contig16299#27060#+#SL1 27060 27061
        WBsf#Cjap.Contig16299#27060#+#SL2 27060 27061
        WBsf#Cjap.Contig16299#31283#-#SL1 31283 31282
        WBsf#Cjap.Contig16299#40712#-#SL1 40712 40711
        WBsf#Cjap.Contig16299#47126#+#SL1 47126 47127
        WBsf#Cjap.Contig16299#47126#+#SL2 47126 47127
        WBsf#Cjap.Contig16299#49956#+#SL1 49956 49957
        WBsf#Cjap.Contig16299#57963#-#SL1 57963 57962
        WBsf#Cjap.Contig16299#62263#+#SL1 62263 62264
        WBsf#Cjap.Contig16299#62263#+#SL2 62263 62264
        WBsf#Cjap.Contig16299#107772#+#SL1 107772 107773
        WBsf#Cjap.Contig16299#120054#+#SL1 120054 120055
        WBsf#Cjap.Contig16299#124755#+#SL1 124755 124756
        WBsf#Cjap.Contig16299#125865#+#SL1 125865 125866
        WBsf#Cjap.Contig16299#129803#+#SL1 129803 129804
        WBsf#Cjap.Contig16299#134467#+#SL2 134467 134468
        WBsf#Cjap.Contig16299#138999#+#SL1 138999 139000
        WBsf#Cjap.Contig16299#145634#-#SL1 145634 145633
        WBsf#Cjap.Contig16299#145634#-#SL2 145634 145633
        WBsf#Cjap.Contig16299#153093#-#SL1 153093 153092
        WBsf#Cjap.Contig16299#154387#+#SL1 154387 154388
      Feature_data: Cjap.Contig16299:Confirmed_intron_RNASeq:1 1 155081
        Cjap.Contig16299:Dust 1 155081
        Cjap.Contig16299:inverted 1 157666
        Cjap.Contig16299:RNASeq:1 1 155081
        Cjap.Contig16299:RNASeq_forward_reads:1 1 155081
        Cjap.Contig16299:RNASeq_polyA:1
        Cjap.Contig16299:RNASeq_reverse_reads:1 1 155081
        Cjap.Contig16299:RNASeq_SL1:1
        Cjap.Contig16299:RNASeq_SL2:1
        Cjap.Contig16299:TRF 1 155081
        Confirmed_intron_EST:Cjap.Contig16299_1 1 150000
        Confirmed_intron_Trinity:Cjap.Contig16299 1 155081
        Confirmed_intron_Trinity:Cjap.Contig16299_1 1 150000
      Homol_data: Oligo_set:Cjap.Contig16299:AGILENT 1 155081
        BLAT_EST:Cjap.Contig16299 1 155081
        BLAT_EST:Cjap.Contig16299_1 1 150000
        BLAT_EST:Cjap.Contig16299_2 150001 155081
        BLAT_mRNA:Cjap.Contig16299_1 1 150000
        BLAT_Trinity:Cjap.Contig16299 1 155081
        BLAT_Trinity:Cjap.Contig16299_1 1 150000
        BLAT_Trinity:Cjap.Contig16299_2 150001 155081
        BLAT_IsoSeq:Cjap.Contig16299_1 1 150000
        BLAT_IsoSeq:Cjap.Contig16299 1 155081
        BLAT_IsoSeq:Cjap.Contig16299_2 150001 155081
        BLAT_OST:Cjap.Contig16299_1 1 150000
        BLAT_tc1:Cjap.Contig16299_1 1 150000
        BLAT_RST:Cjap.Contig16299_1 1 150000
        BLAT_RST:Cjap.Contig16299_2 150001 155081
        BLAT_Nanopore:Cjap.Contig16299_1 1 150000
        Cjap.Contig16299:wublastx_brenneri 1 155081
        Cjap.Contig16299:wublastx_briggsae 1 155081
        Cjap.Contig16299:wublastx_brugia 1 155081
        Cjap.Contig16299:wublastx_fly 1 155081
        Cjap.Contig16299:wublastx_human 1 155081
        Cjap.Contig16299:wublastx_japonica 1 155081
        Cjap.Contig16299:wublastx_ovolvulus 1 155081
        Cjap.Contig16299:wublastx_pristionchus 1 155081
        Cjap.Contig16299:wublastx_remanei 1 155081
        Cjap.Contig16299:wublastx_slimSwissProt 1 155081
        Cjap.Contig16299:wublastx_sratti 1 155081
        Cjap.Contig16299:wublastx_tmuris 1 155081
        Cjap.Contig16299:wublastx_worm 1 155081
        Cjap.Contig16299:wublastx_yeast 1 155081
        Cjap.Contig16299:RepeatMasker 1 155081
  DB_info: Database: NDB NDB_ID Scaffold16299
        NDB_AC GL473447
        NDB_SV GL473447.1
  Origin: From_laboratory: RW
    Species: Caenorhabditis japonica
  Properties: Genomic_canonical
    Checksum: MD5: f1ff0e5df015a5192d0cfefce422b3c9
  Method: Genomic_canonical