WormBase Tree Display for Sequence: Cjap.Contig18158

Cjap.Contig18158 DNA: Cjap.Contig18158 219773
  SMap: S_child: Gene_child: WBGene00120057 121650 120852
        WBGene00121506 359 637
        WBGene00121910 105733 87403
        WBGene00122538 160357 161042
        WBGene00123939 74122 73407
        WBGene00124318 8933 17468
        WBGene00125466 171641 177796
        WBGene00125643 70001 73039
        WBGene00125656 19284 21413
        WBGene00126043 21653 21895
        WBGene00131390 182974 182285
        WBGene00133249 134293 134796
        WBGene00134386 53535 66217
        WBGene00134592 159909 147861
        WBGene00135274 211049 211613
        WBGene00176607 198487 195905
        WBGene00176665 46655 47293
        WBGene00180434 147452 143841
        WBGene00181083 24616 24888
        WBGene00181124 40245 39970
        WBGene00182645 6323 6535
        WBGene00183524 168952 168369
        WBGene00206908 41995 43393
        WBGene00209231 33813 33411
        WBGene00209365 212378 211998
        WBGene00209503 141510 141097
        WBGene00210158 203148 203369
        WBGene00211710 138873 138412
        WBGene00212810 18031 18786
        WBGene00213387 217592 218035
        WBGene00213523 4817 5851
        WBGene00213976 216918 213866
        WBGene00214202 162595 161285
        WBGene00214449 204484 204026
        WBGene00215057 76667 79294
        WBGene00215167 186047 188613
        WBGene00215428 126739 132039
        WBGene00216327 49375 49830
        WBGene00217391 37329 37532
        WBGene00217650 201712 201509
        WBGene00218080 199138 199851
        WBGene00218712 45024 43578
        WBGene00218981 32661 29439
        WBGene00251767 66705 66777
        WBGene00251768 102202 102130
        WBGene00251769 72185 72113
        WBGene00251770 70932 70860
      CDS_child: CJA00853a 121635 120977
        CJA00853b 121596 120977
        CJA02302a 497 637
        CJA02302b 359 637
        CJA02706a 105733 87403
        CJA02706b 104653 87403
        CJA03334a 160387 161002
        CJA03334b 160387 161042
        CJA04735 74122 73407
        CJA05114a 8933 17468
        CJA05114b 8933 17468
        CJA05114c 8933 17468
        CJA06262a 171641 177796
        CJA06262b 171641 177796
        CJA06439a 70352 72683
        CJA06439b 70271 72683
        CJA06452 19284 21413
        CJA06839 21653 21895
        CJA12186 182974 182285
        CJA14045 134293 134673
        CJA15182a 56493 66149
        CJA15182b 53535 66149
        CJA15182c 56493 66149
        CJA15388 159909 147861
        CJA16070 211049 211613
        CJA21035 198487 195905
        CJA21093 46655 47293
        CJA24862 147452 143841
        CJA25511 24616 24888
        CJA25552 40245 39970
        CJA27073 6323 6535
        CJA27951 168952 168369
        CJA31061 41995 43393
        CJA33384a 33813 33411
        CJA33384b 33813 33411
        CJA33518 212378 211998
        CJA33656 141510 141097
        CJA34311 203148 203369
        CJA35863 138873 138412
        CJA36963 18031 18786
        CJA37540 217592 218035
        CJA37676 4817 5851
        CJA38129 216918 213866
        CJA38355 162595 161285
        CJA38602 204484 204026
        CJA39210 76667 79294
        CJA39320 186047 188613
        CJA39581 126761 132039
        CJA40479 49375 49830
        CJA41543 37329 37532
        CJA41802 201712 201509
        CJA42232 199138 199851
        CJA42864 45024 43578
        CJA43133a 32661 29439
        CJA43133b 32661 31574
        CJA43133c 32661 30026
        GBG_japonica_C14B9.7 121635 120977
        GBG_japonica_F14D2.4a 162838 161166
        GBG_japonica_D2007.2a 193839 199851
        GBG_japonica_C14B9.8b 159909 147861
        GBG_japonica_W09B7.1 18211 19538
        GBG_japonica_Y48G1C.12 160387 161042
        GBG_japonica_Y48G1C.4a 171569 175956
        GBG_japonica_D2007.2b 186047 199851
        GBG_japonica_D2007.2d 199560 199851
        GBG_japonica_Y43F8B.1d 96280 91990
        GBG_japonica_D2007.2c 194020 199851
        GBG_japonica_F14D2.12 163136 161166
        GBG_japonica_C14B9.8a 159909 147861
        GBG_japonica_C46F11.1b 56493 65974
        GBG_japonica_C14B9.1 134293 134673
        GBG_japonica_Y75B12B.4 162595 160354
        GBG_japonica_C14B9.10 122211 126135
        GBG_japonica_C14B9.3 67962 72683
        GBG_japonica_F14D2.4b 162838 160993
        GBG_japonica_D2007.4 176287 177796
        GBG_japonica_C37A2.5c 92689 87175
        GBG_japonica_C46F11.1a 56493 65974
        GBG_japonica_Y43F8B.1e 96229 91990
        GBG_japonica_Y48G1C.4b 171641 175956
        GBG_japonica_C14B9.6a 104824 87403
        GBG_japonica_F08F8.10a 96223 95030
        GBG_japonica_C14B9.6c 104824 87403
        GBG_japonica_C14B9.2 126761 132039
        GBG_japonica_F53A3.4d 96257 91990
        GBG_japonica_F07B7.1 18211 19538
      Transcript: CJA00853a.1 121650 120852
        CJA00853a.2 121650 120931
        CJA00853b.1 121596 120977
        CJA02302a.1 497 637
        CJA02302b.1 359 637
        CJA02706a.1 105733 87403
        CJA02706b.1 104653 87403
        CJA03334a.1 160357 161002
        CJA03334b.1 160387 161042
        CJA04735.1 74122 73407
        CJA05114a.1 8933 17468
        CJA05114b.1 8933 17468
        CJA05114c.1 8933 17468
        CJA06262a.1 171641 177796
        CJA06262b.1 171641 177796
        CJA06439a.1 70001 73039
        CJA06439b.1 70271 72683
        CJA06452.1 19284 21413
        CJA06839.1 21653 21895
        CJA12186.1 182974 182285
        CJA14045.1 134293 134796
        CJA15182a.1 56429 66217
        CJA15182b.1 53535 66149
        CJA15182c.1 56493 66149
        CJA15388.1 159909 147861
        CJA16070.1 211049 211613
        CJA21035.1 198487 195905
        CJA21093.1 46655 47293
        CJA24862.1 147452 143841
        CJA25511.1 24616 24888
        CJA25552.1 40245 39970
        CJA27073.1 6323 6535
        CJA27951.1 168952 168369
        CJA31061.1 41995 43393
        CJA33384a.1 33813 33411
        CJA33384b.1 33813 33411
        CJA33518.1 212378 211998
        CJA33656.1 141510 141097
        CJA34311.1 203148 203369
        CJA35863.1 138873 138412
        CJA36963.1 18031 18786
        CJA37540.1 217592 218035
        CJA37676.1 4817 5851
        CJA38129.1 216918 213866
        CJA38355.1 162595 161285
        CJA38602.1 204484 204026
        CJA39210.1 76667 79294
        CJA39320.1 186047 188613
        CJA39581.1 126739 132039
        CJA40479.1 49375 49830
        CJA41543.1 37329 37532
        CJA41802.1 201712 201509
        CJA42232.1 199138 199851
        CJA42864.1 45024 43578
        CJA43133a.1 32661 29439
        CJA43133b.1 32661 31574
        CJA43133c.1 32661 30026
        CJA47903 66705 66777
      Pseudogene: CJA47904 102202 102130
        CJA47905 72185 72113
        CJA47906 70932 70860
      Feature_object: WBsf#Cjap.Contig18158#15636#+#SL2 15636 15637
        WBsf#Cjap.Contig18158#42561#+#SL1 42561 42562
        WBsf#Cjap.Contig18158#51032#+#SL1 51032 51033
        WBsf#Cjap.Contig18158#67961#+#SL1 67961 67962
        WBsf#Cjap.Contig18158#76663#+#SL1 76663 76664
        WBsf#Cjap.Contig18158#105841#+#SL1 105841 105842
        WBsf#Cjap.Contig18158#105841#+#SL2 105841 105842
        WBsf#Cjap.Contig18158#121644#-#SL1 121644 121643
        WBsf#Cjap.Contig18158#121644#-#SL2 121644 121643
        WBsf#Cjap.Contig18158#122209#+#SL1 122209 122210
        WBsf#Cjap.Contig18158#122209#+#SL2 122209 122210
        WBsf#Cjap.Contig18158#125754#-#SL1 125754 125753
        WBsf#Cjap.Contig18158#125754#-#SL2 125754 125753
        WBsf#Cjap.Contig18158#126740#+#SL1 126740 126741
        WBsf#Cjap.Contig18158#126740#+#SL2 126740 126741
        WBsf#Cjap.Contig18158#134289#+#SL1 134289 134290
        WBsf#Cjap.Contig18158#134289#+#SL2 134289 134290
        WBsf#Cjap.Contig18158#137388#-#SL2 137388 137387
        WBsf#Cjap.Contig18158#147454#-#SL1 147454 147453
        WBsf#Cjap.Contig18158#147454#-#SL2 147454 147453
        WBsf#Cjap.Contig18158#159930#-#SL1 159930 159929
        WBsf#Cjap.Contig18158#160374#+#SL1 160374 160375
        WBsf#Cjap.Contig18158#162603#-#SL1 162603 162602
        WBsf#Cjap.Contig18158#168957#-#SL2 168957 168956
        WBsf#Cjap.Contig18158#177085#+#SL1 177085 177086
        WBsf#Cjap.Contig18158#186043#+#SL1 186043 186044
        WBsf#Cjap.Contig18158#193811#+#SL1 193811 193812
        WBsf#Cjap.Contig18158#199330#+#SL1 199330 199331
        WBsf#Cjap.Contig18158#209046#+#SL1 209046 209047
      Feature_data: Cjap.Contig18158:Confirmed_intron_RNASeq:1 1 219773
        Cjap.Contig18158:Dust 1 219773
        Cjap.Contig18158:inverted 1 223436
        Cjap.Contig18158:RNASeq:1 1 219773
        Cjap.Contig18158:RNASeq_forward_reads:1 1 219773
        Cjap.Contig18158:RNASeq_polyA:1
        Cjap.Contig18158:RNASeq_reverse_reads:1 1 219773
        Cjap.Contig18158:RNASeq_SL1:1
        Cjap.Contig18158:RNASeq_SL2:1
        Cjap.Contig18158:TRF 1 219773
        Confirmed_intron_EST:Cjap.Contig18158_1 1 150000
        Confirmed_intron_EST:Cjap.Contig18158_2 150001 219773
        Confirmed_intron_Trinity:Cjap.Contig18158 1 219773
        Confirmed_intron_Trinity:Cjap.Contig18158_1 1 150000
        Confirmed_intron_Trinity:Cjap.Contig18158_2 150001 219773
      Homol_data: Oligo_set:Cjap.Contig18158:AGILENT 1 219773
        BLAT_EST:Cjap.Contig18158 1 219773
        BLAT_EST:Cjap.Contig18158_1 1 150000
        BLAT_EST:Cjap.Contig18158_2 150001 219773
        BLAT_Trinity:Cjap.Contig18158 1 219773
        BLAT_Trinity:Cjap.Contig18158_1 1 150000
        BLAT_Trinity:Cjap.Contig18158_2 150001 219773
        BLAT_mRNA:Cjap.Contig18158_1 1 150000
        BLAT_IsoSeq:Cjap.Contig18158 1 219773
        BLAT_IsoSeq:Cjap.Contig18158_1 1 150000
        BLAT_IsoSeq:Cjap.Contig18158_2 150001 219773
        BLAT_mRNA:Cjap.Contig18158 1 219773
        BLAT_mRNA:Cjap.Contig18158_2 150001 219773
        BLAT_OST:Cjap.Contig18158 1 219773
        BLAT_OST:Cjap.Contig18158_1 1 150000
        BLAT_OST:Cjap.Contig18158_2 150001 219773
        BLAT_tc1:Cjap.Contig18158_1 1 150000
        BLAT_RST:Cjap.Contig18158 1 219773
        BLAT_RST:Cjap.Contig18158_1 1 150000
        BLAT_RST:Cjap.Contig18158_2 150001 219773
        BLAT_Nanopore:Cjap.Contig18158_1 1 150000
        Cjap.Contig18158:wublastx_brenneri 1 219773
        Cjap.Contig18158:wublastx_briggsae 1 219773
        Cjap.Contig18158:wublastx_brugia 1 219773
        Cjap.Contig18158:wublastx_fly 1 219773
        Cjap.Contig18158:wublastx_human 1 219773
        Cjap.Contig18158:wublastx_japonica 1 219773
        Cjap.Contig18158:wublastx_ovolvulus 1 219773
        Cjap.Contig18158:wublastx_pristionchus 1 219773
        Cjap.Contig18158:wublastx_remanei 1 219773
        Cjap.Contig18158:wublastx_slimSwissProt 1 219773
        Cjap.Contig18158:wublastx_sratti 1 219773
        Cjap.Contig18158:wublastx_tmuris 1 219773
        Cjap.Contig18158:wublastx_worm 1 219773
        Cjap.Contig18158:wublastx_yeast 1 219773
        Cjap.Contig18158:RepeatMasker 1 219773
  DB_info: Database: NDB NDB_ID Scaffold18158
        NDB_AC GL475306
        NDB_SV GL475306.1
  Origin: From_laboratory: RW
    Species: Caenorhabditis japonica
  Properties: Genomic_canonical
    Checksum: MD5: 7f59013dc6448f7195b93ebab5b27631
  Method: Genomic_canonical