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WormBase Tree Display for Sequence: D2007

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Name Class

D2007DNAD200713650
SMapS_childGene_childWBGene0001704242269891
WBGene0019578314781584
WBGene000170451345311210
WBGene000170442781237
WBGene000170411072911343
CDS_childD2007.11073611205
D2007.2a77319773
D2007.2b42379773
D2007.2c80799773
D2007.2d90219773
D2007.3:wp25442374395
D2007.42811118
D2007.51343111339
RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g66n11_x17_III_p1073611202
RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g31n11_x17_III_p2811115
RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g62n11_x17_III_m1343111342
RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g182_x17_III_p43577845
RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g143n11_x17_III_p77319770
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g67n11_x17_III_p77317845
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g19n11_x17_III_p2811115
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g53n11_x17_III_m1343111342
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_gD2007.342374392
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g137_x17_III_p1097711209
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g153_x17_III_p42379770
RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g57n11_x17_III_p1073611199
RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g54n11_x17_III_m1343111342
RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g244_x17_III_p77319770
RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g32n11_x17_III_p2811115
RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g120_x17_III_m1238912191
RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g137_x17_III_m1170811497
RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g74_x17_III_p77319770
RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g23n11_x17_III_p1073611202
RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g18n11_x17_III_p2811115
RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g65_x17_III_m1216911739
RNASEQ_embryo_him-8_20dC_post-L1_g92n11_x17_III_m1343111342
RNASEQ_embryo_him-8_20dC_post-L1_g139_x17_III_p88599626
RNASEQ_embryo_him-8_20dC_post-L1_g123_x17_III_p1097711140
RNASEQ_embryo_him-8_20dC_post-L1_g36n11_x17_III_p2811115
RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g9n11_x17_III_p1073611202
RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g107n11_x17_III_p77319770
RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g50n11_x17_III_p2811115
RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g65n11_x17_III_m1343111342
RNASEQ_L4_soma_JK1107_no_DNaseI_g103n11_x17_III_p90219770
RNASEQ_L4_soma_JK1107_no_DNaseI_g32n11_x17_III_p1073611202
RNASEQ_L4_soma_JK1107_no_DNaseI_g113n11_x17_III_p80799080
RNASEQ_L4_soma_JK1107_no_DNaseI_g260_x17_III_p43578125
RNASEQ_L4_soma_JK1107_no_DNaseI_gD2007.342374392
RNASEQ_L4_soma_JK1107_no_DNaseI_g71n11_x17_III_m1343111342
RNASEQ_L4_soma_JK1107_no_DNaseI_g56n11_x17_III_p77317845
RNASEQ_L4_soma_JK1107_no_DNaseI_g36n11_x17_III_p2811115
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g148_x17_III_p89839080
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_gD2007.342374392
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g10n11_x17_III_p1073611202
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g138e5k79_x17_III_p77319146
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g48n11_x17_III_m1343111342
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g131n11_x17_III_p90219770
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g40n11_x17_III_p2811115
RNASEQ_early_embryo_g166_x17_III_p1097711203
RNASEQ_early_embryo_g136_x17_III_p88599770
RNASEQ_early_embryo_g78n11_x17_III_p2811115
RNASEQ_early_embryo_g212_x17_III_p77317832
RNASEQ_early_embryo_g48n11_x17_III_m1343111342
RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g45n11_x17_III_m1343111342
RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g190_x17_III_p43677755
RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g125_x17_III_p80799770
RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g72n11_x17_III_p2811115
RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g131_x17t1_III_p1097711188
RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_gD2007.342374392
RNASEQ_mid-L1_20dC_4hrs_post-L1_g39n11_x17_III_m1343111342
RNASEQ_mid-L1_20dC_4hrs_post-L1_g27n11_x17_III_p2811115
RNASEQ_mid-L1_20dC_4hrs_post-L1_g53n11_x17_III_p1073611202
RNASEQ_mid-L1_20dC_4hrs_post-L1_g149_x17_III_p80799770
RNASEQ_mid-L1_20dC_4hrs_post-L1_g150n11_x17_III_p77317844
RNASEQ_mid-L2_25dC_14hrs_post-L1_g58n11_x17_III_p1073611202
RNASEQ_mid-L2_25dC_14hrs_post-L1_g54n11_x17_III_m1343111342
RNASEQ_mid-L2_25dC_14hrs_post-L1_g66n11_x17_III_p2811115
RNASEQ_mid-L2_25dC_14hrs_post-L1_g101n11_x17_III_p77319770
RNASEQ_mid-L3_25dC_25hrs_post-L1_g70n11_x17_III_m1343111342
RNASEQ_mid-L3_25dC_25hrs_post-L1_g234_x17_III_p43677776
RNASEQ_mid-L3_25dC_25hrs_post-L1_g54n11_x17_III_p2811115
RNASEQ_mid-L3_25dC_25hrs_post-L1_g41n11_x17_III_p1073611202
RNASEQ_mid-L3_25dC_25hrs_post-L1_g140_x17_III_p78399770
RNASEQ_mid-L4_25dC_36hrs_post-L1_g129_x17_III_p1097711203
RNASEQ_mid-L4_25dC_36hrs_post-L1_g174_x17_III_p80799077
RNASEQ_mid-L4_25dC_36hrs_post-L1_g47n11_x17_III_m1343111342
RNASEQ_mid-L4_25dC_36hrs_post-L1_g45n11_x17_III_p2811115
RNASEQ_Adult_Harposporium_exposed_2_24hrs_g66n11_x17_III_m1343111342
RNASEQ_Adult_Harposporium_exposed_2_24hrs_g204_x17_III_p89839014
RNASEQ_Adult_Harposporium_exposed_2_24hrs_g120n11_x17_III_p77319017
RNASEQ_Adult_Harposporium_exposed_2_24hrs_g56n11_x17_III_p1073611202
RNASEQ_Adult_Harposporium_exposed_2_24hrs_g137_x17_III_p97239770
RNASEQ_Adult_Harposporium_exposed_2_24hrs_g29n11_x17_III_p2811115
RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g119n11_x17_III_p77319665
RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g176_x17_III_p43577845
RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g96n11_x17_III_m1343112504
RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g85n11_x17_III_p1097711248
RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g31n11_x17_III_p2811115
RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g98_x17_III_m1247611342
RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_gD2007.342374392
RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g66n11_x17_III_m1343111497
RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g182_x17_III_p43577845
RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g24n11m2_x17_III_p1092611056
RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g24n11_x17_III_p1073611202
RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g114n11_x17_III_p77319080
RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g104n11_x17_III_p90219770
RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g27n11_x17_III_p2811115
RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g113n11_x17_III_m1154711342
RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g86n11_x17_III_m1343111342
RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g205_x17_III_p43577845
RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g124n11e3k56_x17_III_p87478885
RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g25n11_x17_III_p1073611202
RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g22n11_x17_III_p2811115
RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g122n11_x17_III_p90219770
RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g124n11_x17_III_p77319080
RNASEQ_Young_Adult_25dC_46hrs_post-L1_g176_x17_III_p88599770
RNASEQ_Young_Adult_25dC_46hrs_post-L1_g71n11_x17t1_III_p1073611187
RNASEQ_Young_Adult_25dC_46hrs_post-L1_g49n11_x17_III_m1343111342
RNASEQ_Young_Adult_25dC_46hrs_post-L1_g62n11_x17_III_p2811115
D2007.gc12811118
D2007.gc242379773
D2007.gc31345311339
ContigIII.elegans.jigsaw.1589.mRNA158941259882
ContigIII.elegans.jigsaw.1588.mRNA15882463097
ContigIII.elegans.jigsaw.1590.mRNA15901067511861
ContigIII.elegans.jigsaw.1591.mRNA15911350411207
AG1201_D2007.4.T52811013
AG1201_D2007.4.T12811118
gD2007.3.Ts142374395
AG1201_D2007.3.T142379773
AG1201_D2007.3.T388599773
AG1201_D2007.3.T290219773
AG1201_RIT3M.225.T194819226
AG1201_D2007.1.T21073611035
AG1201_D2007.1.T11073611205
AG1201_D2007.1.T31073611205
AG1201_D2007.5.T11343111339
AG1201_RIT3P.704.T11168311940
TranscriptD2007.614781584
D2007.1.11072911343
D2007.2a.142269891
D2007.2a.242309884
D2007.2a.376989884
D2007.2b.142379773
D2007.2c.180799773
D2007.2d.190219773
D2007.4.12781237
D2007.5.11345311210
PCR_productTH:305F101136113501
TH:309G1238294435
TH:309H122771578
TH:310G31040711202
TH:330E6893410573
cenix:305-f101135713505
cenix:309-g1238284436
cenix:309-h122761579
cenix:310-g31040611203
cenix:330-e6893310574
mv_D2007.11073711203
mv_D2007.277329771
mv_D2007.342384393
mv_D2007.42821116
mv_D2007.51134113430
p_D2007.1_93977210735
p_D2007.2_9357317730
sjj_D2007.11032511207
sjj_D2007.275679757
sjj_D2007.338194776
sjj_D2007.43181429
sjj_D2007.51153312681
AlleleWBVar0084311858915891
WBVar0084311959075907
WBVar0084312063456345
WBVar0084312164086408
WBVar0084312268586858
WBVar0199973845014502
WBVar0084312370597059
WBVar021508771228912487
WBVar0084312470797079
WBVar0199973948074808
WBVar0084312571407140
WBVar0084312672477247
WBVar0084312772487248
WBVar0084312875707570
WBVar0084312979667966
WBVar0084313081048104
WBVar0084313181178117
WBVar0084313282388238
WBVar0199557420052005
WBVar0084313383698369
WBVar0084313485918591
WBVar0060085091269304
WBVar0084313586788678
WBVar0084313687678767
WBVar021508891235212632
WBVar0084313788088808
WBVar0139705924192419
WBVar0084313890579057
WBVar0084313992819281
WBVar0084314093309330
WBVar0084314194819481
WBVar0084314295089508
WBVar0084314398549854
WBVar008431441043310433
WBVar008431451049510495
WBVar008431461067210672
WBVar008431471084710847
WBVar0156694415001500
WBVar008431481117511175
WBVar008431491141311413
WBVar008431501146911469
WBVar008431511153211532
WBVar02018979738739
WBVar008431521153711537
WBVar008431531156611566
WBVar008431541158311583
WBVar008431551161311613
WBVar0026989479597959
WBVar0026989579857985
WBVar008431561161911619
WBVar008431571164111641
WBVar008431581200312003
WBVar008431591242412424
WBVar008431601248212482
WBVar008431611252812528
WBVar005319531335613356
WBVar008431621312913129
WBVar0006705939203921
WBVar0140894893049305
WBVar0149461988968896
WBVar0023383293059305
WBVar01722990739739
WBVar0172299111401140
WBVar020723551333413335
WBVar0165711063626362
WBVar02041343101102
WBVar0164562961766176
WBVar0164563076657665
WBVar016456311319113191
WBVar014295739091081
WBVar0006765820462046
WBVar02045682102102
WBVar0006766329462946
WBVar0133146824762476
WBVar0133146941454145
WBVar0006766838563856
WBVar0199021420182018
WBVar0006501446964696
WBVar02132347897897
WBVar0006767857545754
WBVar021323481003410034
WBVar0006501954125412
WBVar0166748420122012
WBVar0006768363986398
WBVar0006502459005900
WBVar0162892412771277
WBVar0006502961746174
WBVar002618071054110542
WBVar0162892521892189
WBVar0006768868366836
WBVar021526641186112192
WBVar0162892626902690
WBVar0162892899269926
WBVar016289291008310083
WBVar002618111054110542
WBVar016289301052310523
WBVar016289311058910589
WBVar004028578383
WBVar016289321246212462
WBVar000676981023510235
WBVar00402858859859
WBVar0040285919391939
WBVar0040286023382338
WBVar0040286130103010
WBVar0040286244014401
WBVar000677031305713057
WBVar0040286348944894
WBVar00843081199199
WBVar0040286450045004
WBVar00843082231231
WBVar00843083457457
WBVar02103263739739
WBVar0040286550915091
WBVar00843084831831
WBVar0040286653815381
WBVar000677081333713337
WBVar0040286754385438
WBVar00843085868868
WBVar0040286866736673
WBVar00843086897897
WBVar0084308710941094
WBVar0040286969796979
WBVar0040287070387038
WBVar000677131333813338
WBVar0084308813181318
WBVar0040287171817181
WBVar0084308913521352
WBVar0084309014041404
WBVar0029674888939433
WBVar0040287272117211
WBVar0040287375217521
WBVar0084309114211421
WBVar0084309214661466
WBVar0040287477507750
WBVar0084309315261526
WBVar01474454263816
WBVar0040287578337833
WBVar0040287682488248
WBVar0084309415761576
WBVar0084309522762276
WBVar0040287783568356
WBVar0084309625772577
WBVar0040287886238623
WBVar0040287987218721
WBVar0084309731603160
WBVar0084309832013201
WBVar0040288094069406
WBVar0084309933903390
WBVar0040288194869486
WBVar0084310037203720
WBVar004028821099710997
WBVar0200336193559355
WBVar0147381786949149
WBVar01266104102102
WBVar0084310137453745
WBVar004028831107511075
WBVar0126610531933193
WBVar004028841116311163
WBVar0084310238443844
WBVar004028851160311603
WBVar0084310338713871
WBVar0084310441184118
WBVar004028861161311613
WBVar004028871242512425
WBVar0084310541284128
WBVar004028881264612646
WBVar0084310643684368
WBVar0084310744134413
WBVar004028891272512725
WBVar0084310844274427
WBVar0084310945424542
WBVar0084311045904590
WBVar014744781193711937
WBVar0084311148914891
WBVar0144702983978397
WBVar0009994132383238
WBVar0084311249024902
WBVar0144703084078407
WBVar0144703184088408
WBVar0009994237483748
WBVar0084311352205220
WBVar0084311452305230
WBVar0084311553645364
WBVar0084311656185618
WBVar0084311756825682
Oligo_setAff_D2007.11073711203
Aff_D2007.277329771
Aff_D2007.342384393
Aff_D2007.42811115
Aff_D2007.51216411343
Feature_objectWBsf99325313691519
WBsf99325432083358
WBsf99325556685818
WBsf99325661686318
WBsf99325769287078
WBsf99325895689656
WBsf101536413691519
WBsf101536532283378
WBsf0099231345413453
WBsf016614279280
WBsf0205201073410735
WBsf0236361134911350
WBsf0253821132911334
WBsf07365411871187
WBsf07365598439843
WBsf0736561120511205
WBsf0736571125311253
WBsf07459212111211
WBsf07505712081208
WBsf07599112591259
WBsf07674711901190
WBsf07759712771277
WBsf0775981119111191
WBsf07916912131213
WBsf0791701120311203
WBsf08045412411241
WBsf12625377037704
WBsf1273651345413453
WBsf127407279280
WBsf12763642314232
WBsf16154789828983
WBsf1623421125311253
WBsf16532112451245
WBsf16532290179017
WBsf16647498419841
WBsf16853712031203
WBsf16853889308930
WBsf16995412261226
WBsf1699551124911249
WBsf1710241073410735
WBsf17481612491250
WBsf22535611191190
WBsf22535711191245
WBsf22535897749880
WBsf2253591120611233
WBsf2253601120611348
WBsf2270861133811210
WBsf2467131119211191
WBsf2477351129011291
WBsf24773698819882
WBsf24773712481249
WBsf27325046964695
WBsf2734111125211253
WBsf2738711137211373
WBsf2740951135511356
WBsf27410510121013
WBsf2741541135411355
WBsf6166321120911208
WBsf61742911741175
WBsf61758912271228
WBsf6178451126311264
WBsf61802898549855
WBsf61868698709871
WBsf6191281124111242
WBsf6192511186611867
WBsf61964312621263
WBsf62013385928591
WBsf62048485948593
WBsf95951342314232
WBsf95951466346633
WBsf95951580618062
WBsf9595161088910890
WBsf9595171156511566
WBsf9595181163511634
WBsf9595191287012869
WBsf3939621040213029
WBsf3948461038911213
WBsf3949141141612976
WBsf3981421069410695
WBsf39889161676188
WBsf4017061050311007
WBsf40243295599875
WBsf4029491069811190
WBsf40502413461602
WBsf40602113461602
WBsf40795256025634
WBsf4092741062610632
WBsf409328981310192
WBsf4118301037312463
WBsf4125551270213154
WBsf41375285638631
WBsf41397313561619
WBsf41445613781577
WBsf4146271042312503
WBsf4175421024811061
WBsf4188341054612346
WBsf4191571044211845
WBsf4194441043913054
WBsf41967996879703
WBsf4201851059311753
WBsf4208401196312314
WBsf4210221260512853
WBsf42151413331534
WBsf4221651050511082
WBsf4229471051613050
WBsf42372525952652
WBsf4251551051710951
WBsf4333761041210716
WBsf4338951160812091
WBsf43943113701564
WBsf43989713261572
WBsf440745957510098
WBsf4414531054611019
WBsf4416861123011396
WBsf4416971166111816
WBsf4419991030510313
WBsf26860425652566
WBsf89819598559855
WBsf64539114801482
WBsf6453921061510696
WBsf6512481351613387
WBsf65923262726283
WBsf65923363036343
WBsf68033618061809
WBsf6803371344313463
WBsf70200662246176
WBsf71794013561619
Feature_dataD2007:Polysome113650
D2007:TranscriptionallyActiveRegion113650
D2007:ChIPSeqTF113650
D2007:TRF113650
D2007:Dust113650
D2007:inverted113650
Homol_dataD2007:RNAi113650
D2007:SAGE113650
D2007:Mass-spec113650
D2007:Expr113650
D2007:TEC_RED113650
D2007:wublastx_brenneri113650
D2007:wublastx_briggsae113650
D2007:wublastx_brugia113650
D2007:wublastx_fly113650
D2007:wublastx_human113650
D2007:wublastx_japonica113650
D2007:wublastx_ovolvulus113650
D2007:wublastx_pristionchus113650
D2007:wublastx_remanei113650
D2007:wublastx_slimSwissProt113650
D2007:wublastx_sratti113650
D2007:wublastx_tmuris113650
D2007:RepeatMasker113650
StructureFromSourceCHROMOSOME_III
Overlap_rightC50C313451
Overlap_leftC14B9
DB_infoDatabaseEMBLNDB_ACFO080532
NDB_ID_L16560
NDB_SVFO080532.2
Secondary_accessionL16560
DB_remarkThe 5' clone is C14B9, 200 bp overlap; the 3' clone is C50C3, 200 bp overlap. Actual start of this clone is at base position 18605 of C14B9; actual end is at 7663 of C50C3.
[121025] Sequence correction: SNP 0 bases @ 9856
[121025] Sequence correction WBsf268604 : Deletion G-1 bases @ 2566
KeywordHTG
EMBL_dump_infoEMBL_dump_methodworm_EMBL-dump
OriginFrom_authorFavello A
Favello T
From_laboratoryRW
Date12 May 1993 00:00:00
SpeciesCaenorhabditis elegans
VisibleCloneD2007
ReferenceWBPaper00015050
Remark?Text
PropertiesGenomic_canonical
ChecksumMD5566caee6547676d555351b95d81906dc
StatusFinished
Submitted12 May 1993 00:00:00
MapSequence-III
Interpolated_map_positionIII-0.375565
MethodGenomic_canonical