WormBase Tree Display for Sequence: F54E2
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F54E2 | DNA | F54E2 | 37005 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child | WBGene00268206 | 31992 | 30443 | |
WBGene00018825 | 34061 | 32129 | ||||
WBGene00018823 | 28403 | 30022 | ||||
WBGene00236799 | 20078 | 20879 | ||||
WBGene00018824 | 14303 | 15071 | ||||
WBGene00018826 | 36222 | 34888 | ||||
WBGene00219966 | 12370 | 12321 | ||||
CDS_child (183) | ||||||
Transcript (15) | ||||||
Transposon | WBTransposon00000385 | 36719 | 36254 | |||
PCR_product (27) | ||||||
Allele (1075) | ||||||
Oligo_set | Aff_F54E2.1 | 29359 | 29958 | |||
Aff_F54E2.4 | 24620 | 23973 | ||||
Aff_F54E2.5 | 31294 | 30536 | ||||
Aff_F54E2.6 | 35685 | 34888 | ||||
Feature_object (142) | ||||||
Feature_data | F54E2:Polysome | 1 | 37005 | |||
F54E2:TranscriptionallyActiveRegion | 1 | 37005 | ||||
F54E2:ChIPSeqTF | 1 | 37005 | ||||
F54E2:TRF | 1 | 37005 | ||||
F54E2:Dust | 1 | 37005 | ||||
F54E2:inverted | 1 | 37005 | ||||
Homol_data (18) | ||||||
Structure | From | Source | CHROMOSOME_V | |||
Overlap_right | T03D3 | 36806 | ||||
Overlap_left | R05D8 | |||||
Clone_left_end | T03D3 | 36806 | ||||
F54E2 | 8301 | |||||
Clone_right_end | R05D8 | 11590 | ||||
DB_info | Database | EMBL | NDB_AC | FO081467 | ||
NDB_ID | _AF106579 | |||||
NDB_SV | FO081467.1 | |||||
Secondary_accession | AF106579 | |||||
DB_remark | The 5' clone is R05D8, 19100 bp overlap; the 3' clone is T03D3, 200 bp overlap. Actual start of this clone is at base position 8301 of F54E2; actual end is at 7480 of T03D3. | |||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Wohldmann P | ||||
Bauer C | ||||||
Gillam B | ||||||
From_laboratory | RW | |||||
Date | 29 Jul 1999 00:00:00 | |||||
09 Oct 1997 00:00:00 | ||||||
Date_directory | ||||||
Species | Caenorhabditis elegans | |||||
Visible | Clone | F54E2 | ||||
Expr_pattern | Expr979 | |||||
Expr980 | ||||||
Remark | added 800 bp to the 5' end 011211 db | |||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | 6601b058ec825ab984d7465a44b8a32f | ||||
Status | Shotgun | |||||
Finished | ||||||
Submitted | 29 Jul 1999 00:00:00 | |||||
Map | Sequence-V | |||||
Interpolated_map_position | V | -13.0596 | ||||
Method | Genomic_canonical |