WormBase Tree Display for Sequence: K09G1
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| K09G1 | DNA | K09G1 | 34657 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00001053 | 27590 | 33974 | |
| WBGene00199641 | 28649 | 28441 | ||||
| WBGene00010727 | 2579 | 9556 | ||||
| WBGene00200431 | 17769 | 17690 | ||||
| WBGene00010728 | 9651 | 10297 | ||||
| CDS_child (192) | ||||||
| Transcript (17) | ||||||
| Genomic_non_canonical | WRM065dE04 | 1280 | 31480 | |||
| PCR_product (17) | ||||||
| Allele (415) | ||||||
| Oligo_set | Aff_K09G1.1 | 8237 | 9268 | |||
| Aff_K09G1.2 | 9809 | 10239 | ||||
| Aff_K09G1.3 | 16600 | 16385 | ||||
| Aff_K09G1.4 | 33106 | 33831 | ||||
| Feature_object (161) | ||||||
| Feature_data | K09G1:Polysome | 1 | 34657 | |||
| K09G1:TranscriptionallyActiveRegion | 1 | 34657 | ||||
| K09G1:ChIPSeqTF | 1 | 34657 | ||||
| K09G1:TRF | 1 | 34657 | ||||
| K09G1:Dust | 1 | 34657 | ||||
| K09G1:inverted | 1 | 34657 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_V | |||
| Overlap_right | T06E4 | 34554 | ||||
| Overlap_left | F25B3 | |||||
| Clone_left_end | K09G1 | 1 | ||||
| T06E4 | 34554 | |||||
| Clone_right_end | F25B3 | 10833 | ||||
| DB_info | Database | EMBL | NDB_AC | Z81101 | ||
| NDB_SV | Z81101.1 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Lloyd CR | ||||
| From_laboratory | HX | |||||
| Date_directory | 960930 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | K09G1 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 47f857add9ab22197760212b1e1ab2fe | ||||
| Status | Finished | 30 Sep 1996 00:00:00 | ||||
| Submitted | 21 Oct 1996 00:00:00 | |||||
| Annotated | 05 Dec 1996 00:00:00 | |||||
| Map | Sequence-V | Ends | Left | 5584 | ||
| Right | 5612 | |||||
| Interpolated_map_position | V | 2.05462 | ||||
| Assembly_tags | Clone left end | 1 | 4 | BEGINNING OF K09G1 | ||
| 34557 | 34554 | BEGINNING OF T06E4 | ||||
| Finished Left | 1 | 4 | K09G1 | |||
| Clone right end | 10830 | 10833 | END OF F25B3 | |||
| annotation | 20085 | 20103 | One M13 clone clearly had 19 Cs, whereas 3 other M13 clones had only 17 Cs. Sequence edited to 19Cs. | |||
| 20958 | 21294 | Using evidence from restriction digest it is estimated that 200 bp are missing from this region of repeats of type RcD1 and Rc35. | ||||
| 22505 | Using evidence from restriction digest it is estimated that 200 bp are missing from this region of RcD1 and Rc35 repeats. | |||||
| 22539 | 23106 | |||||
| Finished Right | 34654 | 34657 | K09G1 | |||
| Method | Genomic_canonical |
