WormBase Tree Display for Sequence: L1_Nanopore_Roach_12323
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| L1_Nanopore_Roach_12323 | DNA | L1_Nanopore_Roach_12323 | 979 | ||
|---|---|---|---|---|---|
| DB_info | Database | WormBase | |||
| Origin | Life_stage | WBls:0000024 | |||
| Species | Caenorhabditis elegans | ||||
| Read_coverage | 3 | ||||
| Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage L1. From Roach, Sadowski et al. (2019) | |||
| Matching_CDS | Y37D8A.23a | Inferred_automatically | transcript_builder.pl | ||
| Y37D8A.23c | |||||
| Matching_transcript | Y37D8A.23a.1 | Inferred_automatically | transcript_builder.pl | ||
| Remark | There are 3 entries comprising this consensus structure | ||||
| The most 5' extent of this structure has been used as a start. The 3' end is the median of a cluster of (33% : 1 of 3) ends. | |||||
| Properties | cDNA | cDNA_EST | |||
| EST_5 | |||||
| Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_IV_2 | |||
| BLAT_Nanopore:CHROMOSOME_II_102 | |||||
| BLAT_Nanopore:CHROMOSOME_III_12 | |||||
| BLAT_Nanopore:CHROMOSOME_III_80 | |||||
| BLAT_Nanopore:CHROMOSOME_III_85 | |||||
| BLAT_Nanopore:CHROMOSOME_III_87 | |||||
| BLAT_Nanopore:CHROMOSOME_III_89 | |||||
| BLAT_Nanopore:OVOC_OM3_94 | |||||
| BLAT_Nanopore:SRAE_chr2_18 | |||||
| BLAT_Nanopore:SRAE_chr1_75 | |||||
| Method | Nanopore |
