WormBase Tree Display for Sequence: L1_Nanopore_Roach_78515
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L1_Nanopore_Roach_78515 | DNA | L1_Nanopore_Roach_78515 | 3187 | ||
---|---|---|---|---|---|
DB_info | Database | WormBase | |||
Origin | Life_stage | WBls:0000024 | |||
Species | Caenorhabditis elegans | ||||
Read_coverage | 4 | ||||
Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage L1. From Roach, Sadowski et al. (2019) | |||
Matching_CDS | Y73B6A.5a | ||||
Y73B6A.5b | Inferred_automatically | transcript_builder.pl | |||
Y73B6A.5d | |||||
Matching_transcript | Y73B6A.5b.1 | Inferred_automatically | transcript_builder.pl | ||
Remark | There are 4 entries comprising this consensus structure | ||||
The cluster of 5' starts (100% : 4 of 4) has been used in this consensus. The 3' end is the median of a cluster of (100% : 4 of 4) ends. | |||||
Properties | cDNA | cDNA_EST | |||
EST_5 | |||||
Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_IV_45 | |||
BLAT_Nanopore:SRAE_chr1_8 | |||||
BLAT_Nanopore:SRAE_chrX_scaffold2_21 | |||||
BLAT_Nanopore:SRAE_chrX_scaffold2_23 | |||||
Method | Nanopore |