WormBase Tree Display for Sequence: L3_Nanopore_Roach_30752
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L3_Nanopore_Roach_30752 | DNA | L3_Nanopore_Roach_30752 | 1712 | ||
---|---|---|---|---|---|
DB_info | Database | WormBase | |||
Origin | Life_stage | WBls:0000035 | |||
Species | Caenorhabditis elegans | ||||
Read_coverage | 5 | ||||
Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage L3. From Roach, Sadowski et al. (2019) | |||
Matching_CDS | ZK757.4d | Inferred_automatically | transcript_builder.pl | ||
Matching_transcript | ZK757.4d.1 | Inferred_automatically | transcript_builder.pl | ||
Remark | There are 5 entries comprising this consensus structure | ||||
The cluster of 5' starts (80% : 4 of 5) has been used in this consensus. The 3' end is the median of a cluster of (40% : 2 of 5) ends. | |||||
Properties | cDNA | cDNA_EST | |||
EST_5 | |||||
Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_III_66 | |||
BLAT_Nanopore:OVOC_OM3_8 | |||||
BLAT_Nanopore:OVOC_OM1b_58 | |||||
BLAT_Nanopore:OVOC_OM1b_117 | |||||
BLAT_Nanopore:SRAE_chr2_32 | |||||
BLAT_Nanopore:SRAE_chr2_53 | |||||
BLAT_Nanopore:SRAE_chr2_67 | |||||
BLAT_Nanopore:SRAE_chr1_66 | |||||
BLAT_Nanopore:SRAE_chr1_68 | |||||
BLAT_Nanopore:SRAE_chrX_scaffold4_5 | |||||
Method | Nanopore |