WormBase Tree Display for Sequence: R03H4

R03H4 DNA: R03H4 24383
  SMap: S_child: Gene_child: WBGene00165188 13229 13249
        WBGene00005894 3210 4598
        WBGene00019849 14446 17026
        WBGene00005893 7142 8497
        WBGene00044617 22480 19984
        WBGene00202327 22400 22695
        WBGene00005892 1339 2647
        WBGene00019853 24207 23180
        WBGene00005412 11532 9866
        WBGene00019851 19845 16981
        WBGene00023327 8911 9232
        WBGene00019850 13307 12075
      CDS_child: R03H4.1 14597 16976
        R03H4.2 7143 8426
        R03H4.3 3210 4598
        R03H4.3:wp117 3210 4598
        R03H4.3:wp240 3210 4598
        R03H4.4 13307 12075
        R03H4.4:wp137 12995 12075
        R03H4.5 19718 17262
        R03H4.6 22457 20148
        R03H4.7:wp140 24198 23180
        R03H4.7a:wp157 24198 23180
        R03H4.9 11532 9866
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g193_x19_V_m 24198 23952
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g112_x19_V_m 23550 23183
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g127_x19_V_m 17573 17265
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g248_x19_V_p 15777 15874
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g119_x19_V_p 43 99
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g178_x19_V_p 16397 16505
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g122_x19_V_m 18415 18008
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g148_x19_V_m 19187 18943
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g132_x19_V_m 17801 17721
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g204_x19_V_m 21391 21293
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g106_x19_V_p 195 759
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g208_x19_V_p 8280 8357
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g149_x19_V_p 207 759
        RNASEQ_L4_soma_JK1107_no_DNaseI_g110_x19_V_m 21796 20151
        RNASEQ_L4_soma_JK1107_no_DNaseI_g203_x19_V_p 207 381
        RNASEQ_L4_soma_JK1107_no_DNaseI_g145_x19_V_p 494 720
        RNASEQ_L4_soma_JK1107_no_DNaseI_g79_x19_V_m 22457 21836
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g163_x19_V_m 24198 23937
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g154_x19_V_p 494 723
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g107_x19_V_p 7449 8230
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g122_x19_V_m 23508 23183
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g120_x19_V_m 23906 23563
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g129_x19_V_p 43 357
        RNASEQ_early_embryo_g119_x19_V_m 24147 23910
        RNASEQ_early_embryo_g92_x19_V_m 23550 23183
        RNASEQ_early_embryo_g98_x19_V_m 23828 23584
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g155_x19_V_m 23996 23901
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g183_x19_V_p 577 743
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g104_x19_V_m 23688 23183
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g163_x19_V_m 24147 24033
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g165_x19_V_p 277 324
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g159_x19_V_p 8060 8363
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g121_x19_V_p 7323 7820
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g127_x19_V_m 23996 23357
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g184_x19_V_m 20887 20787
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g150_x19_V_p 7323 7451
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g206_x19_V_m 21048 20959
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g158_x19_V_m 20484 20220
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g145_x19_V_m 23688 23420
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g83_x19_V_m 21943 20151
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g118_x19_V_m 22287 22048
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g159_x19_V_p 494 577
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g164_x19_V_p 43 212
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g202_x19_V_p 16188 16250
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g87_x19_V_m 22287 22105
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g239_x19_V_p 277 333
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g139_x19_V_m 20935 20745
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g170_x19_V_m 20580 20220
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g179_x19_V_m 21256 20948
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g211_x19_V_m 22102 22002
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g157_x19_V_p 43 191
        R03H4.gc1 43 4598
        R03H4.gc2 7143 8426
        R03H4.gc3 11325 9853
        R03H4.gc4 14597 16976
        R03H4.gc5 19718 17262
        R03H4.gc6 24208 20148
        ContigV.elegans.jigsaw.2227.mRNA2227 11612 9838
        ContigV.elegans.jigsaw.2229.mRNA2229 14523 17877
        ContigV.elegans.jigsaw.2230.mRNA2230 19762 16991
        ContigV.elegans.jigsaw.2232.mRNA2232 24208 23051
        ContigV.elegans.jigsaw.2228.mRNA2228 13372 11997
        ContigV.elegans.jigsaw.2226.mRNA2226 7083 8514
        ContigV.elegans.jigsaw.2231.mRNA2231 22492 19986
        ContigV.elegans.jigsaw.2225.mRNA2225 4214 4701
        ContigV.elegans.jigsaw.2224.mRNA2224 1324 2715
        AG1201_F59E11.1.T1 1376 2634
        AG1201_R03H4.3.T1 3210 4598
        AG1201_R03H4.3.T2 3210 4598
        AG1201_R03H4.2.T1 7143 8426
        AG1201_R03H4.8.T3p 9212 9346
        AG1201_R03H4.8.T2p 9250 9345
        AG1201_R03H4.9.T1 11532 9866
        AG1201_R03H4.4.T1 13307 12075
        AG1201_R03H4.1.T1 14594 16976
        AG1201_R03H4.5.T1 19718 17262
        AG1201_R03H4.6.T5 22457 20148
        AG1201_R03H4.6.T7 22457 20148
        AG1201_R03H4.6.T6 24198 20148
        AG1201_R03H4.6.T1 24198 23180
        AG1201_R03H4.6.T4 24198 23494
      Transcript: R03H4.10 13229 13249
        R03H4.11 22400 22695
        F59E11.1.1 1339 2647
        R03H4.1.1 14446 17026
        R03H4.2.1 7142 8497
        R03H4.3.1 3210 4598
        R03H4.4.1 13307 12075
        R03H4.5.1 19845 16981
        R03H4.6.1 22480 19984
        R03H4.9.1 11532 9866
      Pseudogene: R03H4.7 24207 23180
        R03H4.8 8911 9232
      PCR_product: cenix:164-a8 6298 7887
        cenix:164-b8 22960 24003
        cenix:25-f6 20360 20962
        cenix:61-h11 9881 10385
        cenix:65-h5 18374 19006
        cenix:70-a9 12177 13170
        cenix:70-h8 14458 15434
        cenix:96-a4 1401 2838
        cenix:97-h11 3280 4754
        mv_F59E11.1 1377 2632
        mv_R03H4.1 14598 16974
        mv_R03H4.2 7144 8424
        mv_R03H4.3 3211 4596
        mv_R03H4.4 12077 12994
        mv_R03H4.5 17264 19717
        mv_R03H4.6 20150 22456
        mv_R03H4.7 23182 24197
        mv_R03H4.8 8912 9398
        mv_R03H4.9 9868 11531
        p_F59E11.1_93 761 1375
        p_R03H4.1_93 12994 14596
        p_R03H4.6_93 22458 23181
        sjj2_F59E11.1 1647 2434
        sjj2_R03H4.1 15278 16377
        sjj2_R03H4.5 17673 18598
        sjj2_R03H4.6 20360 21319
        sjj_F59E11.1 1401 2553
        sjj_R03H4.1 15403 17077
        sjj_R03H4.2 7216 8267
        sjj_R03H4.3 3141 4745
        sjj_R03H4.4 11941 13105
        sjj_R03H4.5 18234 19213
        sjj_R03H4.6 21287 22437
        sjj_R03H4.7 23113 24164
        sjj_R03H4.8 8591 9733
        sjj_R03H4.9 9808 10948
      Allele: WBVar01863197 817 817
        WBVar01034067 20411 20411
        WBVar01034068 20759 20759
        WBVar01863198 6348 6348
        WBVar01863199 11026 11026
        WBVar01034069 20879 20879
        WBVar01034070 21057 21057
        WBVar01863200 11028 11028
        WBVar01863201 13073 13073
        WBVar01034071 21167 21167
        WBVar01034072 22453 22453
        WBVar01863202 20472 20472
        WBVar01034073 22714 22714
        WBVar01863203 22717 22717
        WBVar01034074 22822 22822
        WBVar01034075 23067 23067
        WBVar01034076 23214 23214
        WBVar01034077 23310 23310
        WBVar01034078 23331 23331
        WBVar01034079 23349 23349
        WBVar01034080 23349 23349
        WBVar01034081 23671 23671
        WBVar01034082 23746 23746
        WBVar01034083 23844 23844
        WBVar00465660 491 491
        WBVar01034084 23927 23927
        WBVar00465661 571 571
        WBVar00465662 1020 1020
        WBVar01034085 23958 23958
        WBVar00465663 1203 1203
        WBVar01034086 23999 23999
        WBVar00465664 1881 1881
        WBVar01034087 24032 24032
        WBVar00465665 2467 2467
        WBVar02146150 8522 8684
        WBVar01034088 24160 24160
        WBVar00465666 2529 2529
        WBVar00465667 2551 2551
        WBVar00465668 2610 2610
        WBVar00465669 3292 3292
        WBVar00465670 3452 3452
        WBVar00465671 3642 3642
        WBVar00465672 4236 4236
        WBVar00465673 4300 4300
        WBVar00465674 4427 4427
        WBVar00465675 5338 5338
        WBVar00465676 6309 6309
        WBVar00465677 6409 6409
        WBVar00465678 6441 6441
        WBVar00465679 6442 6442
        WBVar00465680 6475 6475
        WBVar00465681 6640 6640
        WBVar00465682 7363 7363
        WBVar00253981 2384 2385
        WBVar00465683 7902 7902
        WBVar00465684 8210 8210
        WBVar02146869 23414 23871
        WBVar00465685 8525 8525
        WBVar00465686 8540 8540
        WBVar00465687 9229 9229
        WBVar00465688 9300 9300
        WBVar00465689 9696 9696
        WBVar00465690 9721 9721
        WBVar00465691 9946 9946
        WBVar00465692 10117 10117
        WBVar00250668 7394 7850
        WBVar00465693 10141 10141
        WBVar00465694 10537 10537
        WBVar02104636 22716 22717
        WBVar00465695 10604 10604
        WBVar00465696 11278 11278
        WBVar00465697 11771 11771
        WBVar00465698 11958 11958
        WBVar00465699 12391 12391
        WBVar00465700 13474 13474
        WBVar00465701 13851 13851
        WBVar00465702 15367 15367
        WBVar00465703 15805 15805
        WBVar00465704 15973 15973
        WBVar00465705 16564 16564
        WBVar00465706 19022 19022
        WBVar01033946 118 118
        WBVar00465707 19165 19165
        WBVar00465708 19273 19273
        WBVar01033947 381 381
        WBVar01033948 468 468
        WBVar00465709 19668 19668
        WBVar00465710 20407 20407
        WBVar01033949 640 640
        WBVar00465711 21464 21464
        WBVar01033950 733 733
        WBVar00465712 21743 21743
        WBVar01033951 1030 1030
        WBVar01033952 1208 1208
        WBVar00465713 23226 23226
        WBVar00465714 23235 23235
        WBVar01033953 1234 1234
        WBVar01033954 1267 1267
        WBVar00465715 23371 23371
        WBVar00465716 24047 24047
        WBVar01033955 1388 1388
        WBVar00465717 24168 24168
        WBVar01033956 1421 1421
        WBVar00254200 5601 5602
        WBVar01033957 1469 1469
        WBVar01033958 1530 1530
        WBVar01033959 1672 1672
        WBVar01033960 1725 1725
        WBVar01033961 1857 1857
        WBVar01617422 818 818
        WBVar01033962 1901 1901
        WBVar01033963 1919 1919
        WBVar01617423 4593 4593
        WBVar01617424 22608 22608
        WBVar01033964 2058 2058
        WBVar01033965 2061 2061
        WBVar01033966 2061 2061
        WBVar01033967 2127 2127
        WBVar01033968 2293 2293
        WBVar01033969 2524 2524
        WBVar01033970 2576 2576
        WBVar01033971 2578 2578
        WBVar01033972 2897 2897
        WBVar01896907 1560 1560
        WBVar01033973 3121 3121
        WBVar01033974 3208 3208
        WBVar01033975 3426 3426
        WBVar02146738 19510 19637
        WBVar01033976 3471 3471
        WBVar01033977 3478 3478
        WBVar01033978 3496 3496
        WBVar01033979 3543 3543
        WBVar01033980 3572 3572
        WBVar01033981 3700 3700
        WBVar01495382 23436 23436
        WBVar01033982 3752 3752
        WBVar01033983 4031 4031
        WBVar01033984 4341 4341
        WBVar01033985 4667 4667
        WBVar01033986 5395 5395
        WBVar01033987 5492 5492
        WBVar01033988 5510 5510
        WBVar01033989 5619 5619
        WBVar01033990 5753 5753
        WBVar01033991 6134 6134
        WBVar01033992 6288 6288
        WBVar01033993 6538 6538
        WBVar01033994 6763 6763
        WBVar01033995 6771 6771
        WBVar01033996 6914 6914
        WBVar01033997 7031 7031
        WBVar01033998 7107 7107
        WBVar01033999 7196 7196
        WBVar00068414 15708 15709
        WBVar01034000 7233 7233
        WBVar01034001 7476 7476
        WBVar01034002 7755 7755
        WBVar01034003 7972 7972
        WBVar01034004 7980 7980
        WBVar01034005 8328 8328
        WBVar01034006 8371 8371
        WBVar01034007 8799 8799
        WBVar01034008 9519 9519
        WBVar01034009 9520 9520
        WBVar01034010 9563 9563
        WBVar01034011 9946 9946
        WBVar00302803 8346 8346
        WBVar01034012 10133 10133
        WBVar01034013 10561 10561
        WBVar01034014 10780 10780
        WBVar01034015 11134 11134
        WBVar01034016 11231 11231
        WBVar01034017 11261 11261
        WBVar00213518 2921 2921
        WBVar00213519 5971 5971
        WBVar01034018 11337 11337
        WBVar01034019 11371 11371
        WBVar00213520 6750 6750
        WBVar00213521 8215 8215
        WBVar01034020 11484 11484
        WBVar01034021 12309 12309
        WBVar00213522 16964 16964
        WBVar00213523 24072 24072
        WBVar01034022 12684 12684
        WBVar01034023 12943 12943
        WBVar01034024 13098 13098
        WBVar01034025 13105 13105
        WBVar01034026 13186 13186
        WBVar01034027 13470 13470
        WBVar01034028 13698 13698
        WBVar01492484 1550 1550
        WBVar01034029 13698 13698
        WBVar01492485 13080 13080
        WBVar01034030 13805 13805
        WBVar01034031 13821 13821
        WBVar01034032 13864 13864
        WBVar01034033 14433 14433
        WBVar01034034 14523 14523
        WBVar01034035 14552 14552
        WBVar01461069 397 397
        WBVar01034036 14857 14857
        WBVar01034037 15449 15449
        WBVar01461070 13754 13754
        WBVar01034038 15450 15450
        WBVar01461071 19376 19376
        WBVar01034039 15473 15473
        WBVar02136804 4882 4882
        WBVar01034040 15473 15473
        WBVar01742456 763 763
        WBVar02136805 7953 7953
        WBVar01034041 15512 15512
        WBVar01742457 1389 1389
        WBVar02136806 10732 10732
        WBVar02136807 17616 17616
        WBVar01742458 1561 1561
        WBVar01034042 15778 15778
        WBVar01742459 1936 1936
        WBVar02136808 17783 17783
        WBVar01034043 16031 16031
        WBVar01742460 2929 2929
        WBVar01034044 16221 16221
        WBVar01034045 16325 16325
        WBVar01742461 3017 3017
        WBVar01742462 4279 4279
        WBVar01034046 16516 16516
        WBVar01034047 16736 16736
        WBVar01742463 4451 4451
        WBVar01742464 6449 6449
        WBVar01034048 16827 16827
        WBVar01034049 17107 17107
        WBVar01742465 6488 6488
        WBVar01034050 17198 17198
        WBVar01742466 8974 8974
        WBVar01742467 10826 10826
        WBVar01034051 17426 17426
        WBVar01034052 17441 17441
        WBVar01742468 11179 11179
        WBVar01742469 15487 15487
        WBVar01034053 17443 17443
        WBVar01742470 15488 15488
        WBVar01034054 17633 17633
        WBVar01034055 17635 17635
        WBVar01742471 15499 15499
        WBVar01742472 16326 16326
        WBVar01034056 17652 17652
        WBVar01034057 17703 17703
        WBVar01742473 17092 17092
        WBVar02024101 8843 8844
        WBVar02024102 10558 10559
        WBVar01742474 18244 18244
        WBVar01034058 17975 17975
        WBVar01034059 18332 18332
        WBVar02024103 15782 15783
        WBVar01742475 18900 18900
        WBVar01742476 19446 19446
        WBVar02024104 16970 16972
        WBVar01034060 18428 18428
        WBVar00277044 5583 5583
        WBVar01034061 18686 18686
        WBVar00277045 16947 16947
        WBVar01742477 20804 20804
        WBVar02060409 3136 3136
        WBVar02024105 22861 22875
        WBVar01742478 22657 22657
        WBVar01034062 19112 19112
        WBVar01034063 19355 19355
        WBVar01034064 19997 19997
        WBVar01034065 20028 20028
        WBVar01034066 20335 20335
      Oligo_set: Aff_F59E11.1 1789 2634
        Aff_R03H4.1 16237 16977
        Aff_R03H4.2 7594 8427
        Aff_R03H4.3 3315 4598
        Aff_R03H4.4 12852 12076
        Aff_R03H4.5 18056 17263
        Aff_R03H4.6 20891 20149
        Aff_R03H4.7 23925 23181
        Aff_R03H4.8 8912 9401
        Aff_R03H4.9 10515 9867
      Feature_object: WBsf194258 21834 21834
        WBsf232191 2635 2717
        WBsf232192 8427 8512
        WBsf232193 16977 17023
        WBsf234167 20147 20038
        WBsf253222 17034 17035
        WBsf255630 2718 2719
        WBsf255631 860 861
        WBsf255821 8513 8514
        WBsf255822 4704 4705
        WBsf255823 11997 11996
        WBsf255824 17144 17143
        WBsf255825 19987 19986
        WBsf255826 20032 20031
        WBsf629104 872 873
        WBsf629996 842 843
        WBsf633466 16979 16978
        WBsf635106 23017 23016
        WBsf635107 23053 23052
        WBsf636307 23013 23012
        WBsf971185 7141 7142
        WBsf971186 15257 15258
        WBsf509244 13300 13969
        WBsf522562 17627 17725
        WBsf522669 16387 17116
        WBsf531459 13678 13822
        WBsf533929 13722 13841
        WBsf268504 5579 5580
        WBsf979081 22313 22351
        WBsf647042 8833 8833
        WBsf661523 14544 14544
        WBsf669196 23830 23777
        WBsf686361 23068 23068
        WBsf686362 23931 23934
        WBsf708298 13746 13746
        WBsf263280 7439 7621
        WBsf263281 7719 7770
        WBsf263282 19259 19335
      Feature_data: R03H4:Polysome 1 24383
        R03H4:TranscriptionallyActiveRegion 1 24383
        R03H4:TRF 1 24383
        R03H4:Dust 1 24383
        R03H4:inverted 1 24383
      Homol_data: R03H4:RNAi 1 24383
        R03H4:SAGE 1 24383
        R03H4:Mass-spec 1 24383
        R03H4:wublastx_brenneri 1 24383
        R03H4:wublastx_briggsae 1 24383
        R03H4:wublastx_brugia 1 24383
        R03H4:wublastx_human 1 24383
        R03H4:wublastx_japonica 1 24383
        R03H4:wublastx_ovolvulus 1 24383
        R03H4:wublastx_pristionchus 1 24383
        R03H4:wublastx_remanei 1 24383
        R03H4:wublastx_slimSwissProt 1 24383
        R03H4:wublastx_sratti 1 24383
        R03H4:wublastx_tmuris 1 24383
        R03H4:wublastx_worm 1 24383
        R03H4:RepeatMasker 1 24383
  Structure: From: Source: CHROMOSOME_V
    Overlap_right: C25E10 24184
    Overlap_left: F59E11
    Clone_left_end: R03H4 1
    Clone_right_end: F59E11 6167
  DB_info: Database: EMBL NDB_AC FO080671
        NDB_ID _U50300
        NDB_SV FO080671.2
    Secondary_accession: U50300
    DB_remark: The 5' clone is F59E11, 4550 bp overlap; the 3' clone is C25E10, 200 bp overlap. Actual start of this clone is at base position 1 of R03H4; actual end is at 15590 of C25E10.
      [121025] Sequence correction WBsf268504 : Deletion T-1 bases @ 5580
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Bradshaw H
    From_laboratory: RW
    Date: 03 Jan 1997 00:00:00
      15 Dec 1995 00:00:00
    Date_directory: 951208
    Species: Caenorhabditis elegans
  Visible: Clone: R03H4
  Properties: Genomic_canonical
    Checksum: MD5: 277565a3a5a9a1f817e7b9ba889d5a4e
    Status: Shotgun
      Finished
      Submitted: 03 Jan 1997 00:00:00
  Map: Sequence-V
  Interpolated_map_position: V 1.90527
  Method: Genomic_canonical