WormBase Tree Display for Sequence: W06D4
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| W06D4 | DNA | W06D4 | 17639 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00012297 | 8074 | 10430 | |
| WBGene00305642 | 8908 | 9026 | ||||
| WBGene00004838 | 5192 | 5079 | ||||
| WBGene00004839 | 7929 | 7820 | ||||
| WBGene00014545 | 1255 | 1183 | ||||
| WBGene00012296 | 6223 | 7754 | ||||
| WBGene00200427 | 1173 | 1258 | ||||
| WBGene00012298 | 13090 | 10423 | ||||
| WBGene00006503 | 14333 | 13208 | ||||
| CDS_child (151) | ||||||
| Transcript | W06D4.7 | 5192 | 5079 | |||
| W06D4.8 | 7929 | 7820 | ||||
| W06D4.9 | 1173 | 1258 | ||||
| W06D4.10 | 8908 | 9026 | ||||
| W06D4.t1 | 1255 | 1183 | ||||
| W06D4.2.1 | 6223 | 7754 | ||||
| W06D4.2.2 | 6243 | 7754 | ||||
| W06D4.3.1 | 8074 | 10430 | ||||
| W06D4.4.1 | 13090 | 10423 | ||||
| W06D4.5.1 | 14333 | 13208 | ||||
| Nongenomic | yk255b9 | 10483 | 13091 | |||
| PCR_product (20) | ||||||
| Allele (200) | ||||||
| Oligo_set | Aff_T06D10.A | 9573 | 10384 | |||
| Aff_T06D10.B | 11252 | 10492 | ||||
| Aff_T06D10.C | 14328 | 13664 | ||||
| Aff_W06D4.2 | 6585 | 7485 | ||||
| Aff_W06D4.6 | 16724 | 17552 | ||||
| Feature_object (273) | ||||||
| Feature_data | W06D4:Polysome | 1 | 17639 | |||
| W06D4:TranscriptionallyActiveRegion | 1 | 17639 | ||||
| W06D4:ChIPSeqTF | 1 | 17639 | ||||
| W06D4:TRF | 1 | 17639 | ||||
| W06D4:Dust | 1 | 17639 | ||||
| W06D4:inverted | 1 | 17639 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_I | |||
| Overlap_right | T06D10 | 17536 | ||||
| Overlap_left | C31H5 | |||||
| Clone_left_end | W06D4 | 1 | ||||
| Clone_right_end | C31H5 | 12570 | ||||
| DB_info | Database | EMBL | NDB_AC | AL034364 | ||
| NDB_SV | AL034364.1 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Kershaw JK | ||||
| From_laboratory | HX | |||||
| Date_directory | 970723 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | W06D4 | ||||
| Remark | NOTE: The actual W06D4 clone was found to be chimeric (ectopic sequence has been removed) | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 63a22e0f4cbe12d03943126b18a26722 | ||||
| Status | Finished | 23 Jul 1997 00:00:00 | ||||
| Submitted | 30 Nov 1998 00:00:00 | |||||
| Annotated | 01 Jan 1980 00:00:00 | |||||
| Map | Sequence-I | Ends | Left | 4315 | ||
| Right | 4338 | |||||
| Interpolated_map_position | I | 3.4504 | ||||
| Assembly_tags | Finished Left | 1 | 4 | |||
W06D4 | ||||||
| Clone left end | 1 | 4 | W06D4 | |||
| annotation | 2382 | 2371 | some m13s read 11 As, rather than 12 here. | |||
| 5042 | 5150 | single m13 clone confirmed by restriction digest with HindIII. base accuracy not guarenteed. | ||||
| 5213 | 5238 | single m13 clone confirmed by restriction digest with HindIII. base accuracy not guarenteed. | ||||
| 12707 | 12711 | single M13 clone. base accuracy not guarenteed. | ||||
| Finished Right | 17639 | 17635 | ||||
| comment | 24 | 1 | ?diverges from C31H5 | |||
| Clone right end | 12567 | 12570 | C31H5 | |||
| Method | Genomic_canonical |
