WormBase Tree Display for Sequence: Y40B1A
expand all nodes | collapse all nodes | view schema
| Y40B1A | DNA | Y40B1A | 28054 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00012735 | 23037 | 16202 | |
| WBGene00305726 | 23035 | 22809 | ||||
| WBGene00220147 | 26968 | 26834 | ||||
| WBGene00012732 | 217 | 3112 | ||||
| WBGene00012734 | 3215 | 15792 | ||||
| WBGene00199416 | 26229 | 26148 | ||||
| CDS_child (198) | ||||||
| Transcript (11) | ||||||
| PCR_product (15) | ||||||
| Allele (831) | ||||||
| Oligo_set | Aff_Y40B1A.A | 1510 | 2925 | |||
| Aff_Y40B1A.B | 3229 | 5408 | ||||
| Aff_Y40B1A.C | 8196 | 9398 | ||||
| Aff_Y40B1A.D | 12622 | 14556 | ||||
| Aff_Y40B1A.E | 18967 | 16824 | ||||
| Feature_object (375) | ||||||
| Feature_data | Y40B1A:Polysome | 1 | 28054 | |||
| Y40B1A:TranscriptionallyActiveRegion | 1 | 28054 | ||||
| Y40B1A:ChIPSeqTF | 1 | 28054 | ||||
| Y40B1A:TRF | 1 | 28054 | ||||
| Y40B1A:Dust | 1 | 28054 | ||||
| Y40B1A:inverted | 1 | 28054 | ||||
| Homol_data (18) | ||||||
| Structure | From | Source | CHROMOSOME_I | |||
| Overlap_right | C01A2 | 27947 | ||||
| Overlap_left | W08E3 | |||||
| Clone_left_end | C01A2 | 27947 | ||||
| Y40B1A | 1 | |||||
| Clone_right_end | W08E3 | 103 | ||||
| Y40B1A | 28054 | |||||
| DB_info | Database | EMBL | NDB_AC | AL034392 | ||
| NDB_SV | AL034392.1 | |||||
| Secondary_accession | AL009206 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Harris BR | ||||
| From_laboratory | HX | |||||
| Date_directory | 981126 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | Y40B1A | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | a40cd460474146180ff4ab85e02cf797 | ||||
| Status | Finished | 26 Nov 1998 00:00:00 | ||||
| Submitted | 17 Dec 1998 00:00:00 | |||||
| Annotated | 03 Dec 1998 00:00:00 | |||||
| Map | Sequence-I | Ends | Left | 6798 | ||
| Right | 6815 | |||||
| Interpolated_map_position | I | 19.2976 | ||||
| Assembly_tags | Clone right end | 100 | 103 | W08E3 | ||
| Finished Left | 1 | 7 | Y40B1A | |||
| annotation | 19083 | 19198 | First select a Feature - [ ] Unsure [x] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [x] Single clone region [ ] Forced join [ ] Other Add a comment here - | |||
| 19286 | 19301 | First select a Feature - [ ] Unsure [x] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [x] Single clone region [ ] Forced join [ ] Other Add a comment here - Dye-primer read from a single clone only All other chemistries fail. | ||||
| 19631 | 19733 | First select a Feature - [ ] Unsure [x] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [x] Single clone region [ ] Forced join [ ] Other Add a comment here - | ||||
| Finished Right | 28054 | 28042 | Y40B1A | |||
| Clone left end | 27947 | 27950 | C01A2 | |||
| Method | Genomic_canonical |
