WormBase Tree Display for Transcript: W04G5.2c
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W04G5.2c | SMap | S_parent | Sequence | W04G5 | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 22 | |||
4833 | 4954 | |||||
4997 | 5282 | |||||
5333 | 5490 | |||||
DB_info | DB_remark | non-protein coding RNA rab-11.2 | ||||
Database | RNAcentral | URSid | URS00005432F8 | |||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Visible | Gene | WBGene00004275 | ||||
Corresponding_PCR_product | cenix:177-d3 | |||||
mv_W04G5.2 | ||||||
sjj_W04G5.2 | ||||||
Corresponding_oligo_set (17) | ||||||
RNAi_result | WBRNAi00054790 | |||||
WBRNAi00026491 | ||||||
WBRNAi00081669 | ||||||
WBRNAi00036284 | ||||||
WBRNAi00026490 | ||||||
WBRNAi00004425 | ||||||
Microarray_results (20) | ||||||
Brief_identification | non-coding Transcript Isoform | |||||
Last_reviewed | 06 Jul 2012 00:00:00 | WBPerson1983 | ||||
Remark | [120706 pad] This Transcript appears to exhibit novel splicing to the 3' UTR of W04G5.10 where an out of frame overlap could be used as an alternate initiation site. This may be a productive of non-productive transcript and is novel when compared to the paralogous rab-11.1 locus. | Accession_evidence | NDB | FR831563 | ||
FR831562 | ||||||
Curator_confirmed | WBPerson1983 | |||||
From_analysis | RNASeq_Hillier_elegans | |||||
Properties | Transcript | ncRNA | ||||
Isoform | Accession_evidence | NDB | FR831563 | |||
FR831562 | ||||||
Method | non_coding_transcript |