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WormBase Tree Display for Transcript: W04G5.2c

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Name Class

W04G5.2cSMapS_parentSequenceW04G5
StructureSource_exons122
48334954
49975282
53335490
DB_infoDB_remarknon-protein coding RNA rab-11.2
DatabaseRNAcentralURSidURS00005432F8
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
VisibleGeneWBGene00004275
Corresponding_PCR_productcenix:177-d3
mv_W04G5.2
sjj_W04G5.2
Corresponding_oligo_set (17)
RNAi_resultWBRNAi00054790
WBRNAi00026491
WBRNAi00081669
WBRNAi00036284
WBRNAi00026490
WBRNAi00004425
Microarray_results (20)
Brief_identificationnon-coding Transcript Isoform
Last_reviewed06 Jul 2012 00:00:00WBPerson1983
Remark[120706 pad] This Transcript appears to exhibit novel splicing to the 3' UTR of W04G5.10 where an out of frame overlap could be used as an alternate initiation site. This may be a productive of non-productive transcript and is novel when compared to the paralogous rab-11.1 locus.Accession_evidenceNDBFR831563
FR831562
Curator_confirmedWBPerson1983
From_analysisRNASeq_Hillier_elegans
PropertiesTranscriptncRNA
IsoformAccession_evidenceNDBFR831563
FR831562
Methodnon_coding_transcript