WormBase Tree Display for CDS: B0024.2
expand all nodes | collapse all nodes | view schema
B0024.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | B0024 | |||
Structure | Source_exons | 1 | 117 | |||
197 | 973 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q17418 | ||
UniProt | UniProtAcc | Q17418 | ||||
UniProt_GCRP | UniProtAcc | Q17418 | ||||
AlphaFold | entry | Q17418 | ||||
NCBI_protein | GI_number | GI:3873668 | ||||
TREEFAM | TREEFAM_ID | TF316783 | ||||
Protein_id | CHROMOSOME_V | CAA94875 | 1 | |||
DB_remark | COL-150 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00000723 | ||||
Corresponding_transcript | B0024.2.1 | |||||
Corresponding_protein | CE05147 | |||||
Corresponding_PCR_product | cenix:192-e1 | |||||
mv_B0024.2 | ||||||
sjj_B0024.2 | ||||||
Corresponding_oligo_set (18) | ||||||
Matching_cDNA (22) | ||||||
RNAi_result | WBRNAi00038651 | |||||
WBRNAi00088652 | ||||||
WBRNAi00027944 | ||||||
WBRNAi00088759 | ||||||
WBRNAi00009550 | ||||||
Microarray_results (19) | ||||||
Brief_identification | Nematode cuticle collagen N-terminal domain-containing protein | Accession_evidence | UniProt | TR:Q17418 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |