WormBase Tree Display for CDS: B0496.3e
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| B0496.3e | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | B0496 | |||
| Structure | Source_exons (34) | |||||
| DB_info | Database | KEGG | KEGG_id | 2.7.11.1 | ||
| TrEMBL | UniProtAcc | H2KYA5 | ||||
| UniProt | UniProtAcc | H2KYA5 | ||||
| UniProt_GCRP | UniProtAcc | H2KYA5 | ||||
| AlphaFold | entry | H2KYA5 | ||||
| NCBI_protein | GI_number | GI:351018151 | ||||
| TREEFAM | TREEFAM_ID | TF324572 | ||||
| Protein_id | CHROMOSOME_IV | CCD62055 | 1 | |||
| DB_remark | UNC-82 protein; contains similarity to Pfam domain PF00069 (Protein kinase domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR000719 (Protein kinase domain) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | EMBL | RST3_519749 | |||
| Visible | Gene | WBGene00006814 | ||||
| Corresponding_transcript | B0496.3e.1 | |||||
| Corresponding_protein | CE44360 | |||||
| Corresponding_PCR_product | cenix:111-b4 | |||||
| cenix:145-b9 | ||||||
| cenix:181-d2 | ||||||
| cenix:39-a7 | ||||||
| mv_B0496.3 | ||||||
| mv_B0496.4 | ||||||
| sjj_B0496.3 | ||||||
| sjj_B0496.4 | ||||||
| smd_B0496.3 | ||||||
| Corresponding_oligo_set (35) | ||||||
| Matching_cDNA | L1_Nanopore_Roach_82348 | |||||
| L2_Nanopore_Roach_81742 | ||||||
| L3_Nanopore_Roach_77385 | ||||||
| elegans_PE_SS_GG8201|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG8201|c3_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result (25) | ||||||
| Microarray_results (42) | ||||||
| Brief_identification | non-specific serine/threonine protein kinase | Accession_evidence | UniProt | TR:H2KYA5 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 11 Oct 2017 16:25:22 | WBPerson4025 | ||||
| Remark | [20091226 wn] Added isoform based on unpublished data, EMBL accession RST3_519749 | Curator_confirmed | WBPerson10213 | |||
| [171011 gw3] This CDS has been inspected and looks satisfactory. | Curator_confirmed | WBPerson4025 | ||||
| From_analysis | RNASeq | |||||
| Associated_feature | WBsf027706 | |||||
| Method | curated |
