WormBase Tree Display for Sequence: BE0003N10
expand all nodes | collapse all nodes | view schema
BE0003N10 | DNA | BE0003N10 | 28863 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child (12) | ||||
CDS_child (176) | ||||||
Transcript (11) | ||||||
Pseudogene | BE0003N10.t1 | 9234 | 9304 | |||
BE0003N10.t2 | 10111 | 10181 | ||||
BE0003N10.t3 | 11144 | 11214 | ||||
BE0003N10.t4 | 13555 | 13625 | ||||
BE0003N10.t5 | 15500 | 15570 | ||||
BE0003N10.t6 | 16388 | 16459 | ||||
PCR_product | cenix:173-d3 | 5885 | 6816 | |||
cenix:226-e1 | 17257 | 17531 | ||||
cenix:230-h1 | 4826 | 5000 | ||||
sjj2_BE0003N10.1 | 11805 | 12761 | ||||
sjj2_BE0003N10.3 | 20076 | 20926 | ||||
Allele (1079) | ||||||
Feature_object | WBsf991207 | 1108 | 1258 | |||
WBsf991208 | 2328 | 2478 | ||||
WBsf991209 | 4828 | 4874 | ||||
WBsf991210 | 5468 | 5517 | ||||
WBsf991211 | 6548 | 6612 | ||||
WBsf991212 | 9188 | 9338 | ||||
WBsf991213 | 11048 | 11198 | ||||
WBsf991214 | 11388 | 11538 | ||||
WBsf991215 | 12928 | 13078 | ||||
WBsf991216 | 14128 | 14278 | ||||
WBsf991217 | 22848 | 22998 | ||||
WBsf1014166 | 1188 | 1320 | ||||
WBsf1014167 | 2388 | 2538 | ||||
WBsf1014168 | 9188 | 9338 | ||||
WBsf1014169 | 11048 | 11198 | ||||
WBsf1014170 | 12908 | 13058 | ||||
WBsf1014171 | 13428 | 13578 | ||||
WBsf1014172 | 14088 | 14238 | ||||
WBsf1014173 | 22848 | 22998 | ||||
WBsf019739 | 5771 | 5770 | ||||
WBsf022059 | 27538 | 27537 | ||||
WBsf073006 | 132 | 132 | ||||
WBsf074145 | 224 | 224 | ||||
WBsf074146 | 6185 | 6185 | ||||
WBsf074147 | 21311 | 21311 | ||||
WBsf074263 | 5398 | 5398 | ||||
WBsf075306 | 5625 | 5625 | ||||
WBsf076337 | 5509 | 5509 | ||||
WBsf076338 | 15120 | 15120 | ||||
WBsf077120 | 14829 | 14829 | ||||
WBsf078009 | 6242 | 6242 | ||||
WBsf078010 | 24784 | 24784 | ||||
WBsf126518 | 21801 | 21800 | ||||
WBsf126740 | 26582 | 26581 | ||||
WBsf126839 | 6059 | 6060 | ||||
WBsf126840 | 25105 | 25104 | ||||
WBsf161561 | 5013 | 5012 | ||||
WBsf161665 | 27207 | 27206 | ||||
WBsf161732 | 5398 | 5398 | ||||
WBsf162859 | 132 | 132 | ||||
WBsf163515 | 5625 | 5625 | ||||
WBsf164486 | 20822 | 20822 | ||||
WBsf165553 | 1678 | 1678 | ||||
WBsf165571 | 20859 | 20859 | ||||
WBsf165575 | 24784 | 24784 | ||||
WBsf167509 | 8680 | 8680 | ||||
WBsf167835 | 11992 | 11992 | ||||
WBsf167846 | 24898 | 24898 | ||||
WBsf170146 | 224 | 224 | ||||
WBsf170147 | 21311 | 21311 | ||||
WBsf170221 | 5509 | 5509 | ||||
WBsf170227 | 15120 | 15120 | ||||
WBsf224431 | 14607 | 14830 | ||||
WBsf226175 | 15126 | 14819 | ||||
WBsf226176 | 15126 | 15067 | ||||
WBsf226177 | 15126 | 15084 | ||||
WBsf245559 | 14828 | 14829 | ||||
WBsf247596 | 14820 | 14819 | ||||
WBsf247597 | 24000 | 23999 | ||||
WBsf247598 | 24792 | 24791 | ||||
WBsf955662 | 1393 | 1394 | ||||
WBsf955663 | 1833 | 1832 | ||||
WBsf955686 | 6059 | 6060 | ||||
WBsf955750 | 21341 | 21340 | ||||
WBsf955754 | 21705 | 21704 | ||||
WBsf955755 | 21801 | 21800 | ||||
WBsf035335 | 4322 | 5920 | ||||
WBsf035337 | 6322 | 6720 | ||||
WBsf392660 | 5795 | 6106 | ||||
WBsf392920 | 1912 | 1944 | ||||
WBsf393576 | 5876 | 5994 | ||||
WBsf394426 | 5774 | 6003 | ||||
WBsf395172 | 22580 | 23174 | ||||
WBsf396149 | 21555 | 21973 | ||||
WBsf396197 | 5491 | 6101 | ||||
WBsf396506 | 18000 | 18039 | ||||
WBsf396936 | 5784 | 6099 | ||||
WBsf398417 | 21570 | 21886 | ||||
WBsf398484 | 22705 | 23032 | ||||
WBsf398570 | 1625 | 1714 | ||||
WBsf398905 | 5825 | 5980 | ||||
WBsf401903 | 21642 | 22050 | ||||
WBsf403829 | 5717 | 6143 | ||||
WBsf404935 | 5808 | 6082 | ||||
WBsf405841 | 5808 | 6082 | ||||
WBsf406834 | 5701 | 6082 | ||||
WBsf407556 | 5735 | 6201 | ||||
WBsf410118 | 5977 | 5982 | ||||
WBsf410497 | 5760 | 6123 | ||||
WBsf412286 | 5549 | 6120 | ||||
WBsf412923 | 21477 | 21968 | ||||
WBsf413275 | 5775 | 6092 | ||||
WBsf416158 | 5829 | 6037 | ||||
WBsf416882 | 5822 | 6101 | ||||
WBsf417395 | 1104 | 2077 | ||||
WBsf417428 | 13412 | 14077 | ||||
WBsf417541 | 2328 | 3292 | ||||
WBsf417668 | 11091 | 11566 | ||||
WBsf418013 | 15255 | 15587 | ||||
WBsf418186 | 3601 | 3781 | ||||
WBsf418446 | 8534 | 8572 | ||||
WBsf419153 | 5820 | 6086 | ||||
WBsf419470 | 21357 | 21912 | ||||
WBsf419625 | 3651 | 3671 | ||||
WBsf420628 | 5750 | 6025 | ||||
WBsf421138 | 1371 | 1547 | ||||
WBsf421141 | 4520 | 4650 | ||||
WBsf421160 | 7580 | 7653 | ||||
WBsf421299 | 4148 | 4307 | ||||
WBsf421684 | 3583 | 3781 | ||||
WBsf421796 | 1849 | 2048 | ||||
WBsf422259 | 1374 | 1468 | ||||
WBsf422346 | 2411 | 2553 | ||||
WBsf422408 | 3582 | 3670 | ||||
WBsf422536 | 5880 | 5984 | ||||
WBsf422787 | 6616 | 6618 | ||||
WBsf425824 | 5876 | 5986 | ||||
WBsf427367 | 5741 | 6109 | ||||
WBsf428372 | 5748 | 6099 | ||||
WBsf429192 | 9172 | 9719 | ||||
WBsf429343 | 21420 | 21890 | ||||
WBsf429361 | 14080 | 14319 | ||||
WBsf429424 | 5807 | 6061 | ||||
WBsf430277 | 5841 | 5968 | ||||
WBsf430409 | 22723 | 23032 | ||||
WBsf431146 | 5792 | 6086 | ||||
WBsf431795 | 5804 | 6090 | ||||
WBsf432338 | 22875 | 23056 | ||||
WBsf432689 | 5779 | 6072 | ||||
WBsf436974 | 5885 | 6052 | ||||
WBsf437304 | 11039 | 11105 | ||||
WBsf437713 | 5816 | 6061 | ||||
WBsf438897 | 5822 | 6069 | ||||
WBsf440644 | 5766 | 6097 | ||||
WBsf441425 | 4649 | 4667 | ||||
WBsf441554 | 1475 | 1492 | ||||
WBsf441866 | 828 | 916 | ||||
WBsf442637 | 5889 | 6044 | ||||
WBsf046582 | 5035 | 6582 | ||||
WBsf046583 | 25245 | 25502 | ||||
WBsf046584 | 26019 | 26448 | ||||
WBsf046585 | 26621 | 26706 | ||||
WBsf650834 | 5873 | 5856 | ||||
WBsf666445 | 21802 | 21779 | ||||
WBsf666555 | 22821 | 22749 | ||||
WBsf678752 | 17733 | 17735 | ||||
WBsf678753 | 21898 | 21931 | ||||
WBsf678754 | 22972 | 23024 | ||||
WBsf265281 | 1094 | 1214 | ||||
Feature_data | BE0003N10:Polysome | 1 | 28863 | |||
BE0003N10:TranscriptionallyActiveRegion | 1 | 28863 | ||||
BE0003N10:ChIPSeqTF | 1 | 28863 | ||||
BE0003N10:TRF | 1 | 28863 | ||||
BE0003N10:Dust | 1 | 28863 | ||||
BE0003N10:inverted | 1 | 28863 | ||||
Homol_data (19) | ||||||
Structure | From | Source | CHROMOSOME_III | |||
Overlap_right | Y92C3B | 28664 | ||||
Overlap_left | E_BE45912 | |||||
DB_info | Database | EMBL | NDB_AC | FO080241 | ||
NDB_ID | _AC092690 | |||||
NDB_SV | FO080241.1 | |||||
Secondary_accession | AC092690 | |||||
DB_remark | The 5' clone is E_BE45912, 3000 bp overlap; the 3' clone is Y92C3B, 200 bp overlap. | |||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Cordum H | ||||
Elliott G | ||||||
From_laboratory | RW | |||||
Date | 17 Jul 2001 00:00:00 | |||||
Date_directory | ||||||
Species | Caenorhabditis elegans | |||||
Visible | Clone | BE0003N10 | ||||
Remark | [20030303 db] added 2800 bp to the 5' end | |||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | 5d534d817a339b4538da6dc201bbf69c | ||||
Status | Finished | |||||
Submitted | 17 Jul 2001 00:00:00 | |||||
Map | Sequence-III | |||||
Interpolated_map_position | III | -24.7817 | ||||
Method | Genomic_canonical |